Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC108479.2-201ENST00000617314 601 ntBASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK11AQ9UQ88 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 SNORD51-201ENST00000384320 80 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 Y_RNA.598-201ENST00000410480 95 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AL590233.1-201ENST00000430017 456 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 SDCBPP1-201ENST00000440192 890 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 USP9YP12-201ENST00000450481 570 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 snoU13.4-201ENST00000458916 104 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 RPS29P2-201ENST00000479278 136 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 HMGB3P15-201ENST00000507326 574 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 SNORA70.18-201ENST00000516696 98 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 IGKV2D-23-201ENST00000518179 286 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AC126177.3-201ENST00000551839 688 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AL360157.1-201ENST00000565962 87 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AL353997.4-201ENST00000586196 166 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AL136363.2-201ENST00000604173 851 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AL390208.1-201ENST00000605885 644 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AC008121.2-201ENST00000614647 523 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AC138932.5-201ENST00000617759 563 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 TEX21P-201ENST00000447107 1476 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 OTUD4P1-201ENST00000237841 3067 ntBASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.62□□□□□ -1.51
CDK11AQ9UQ88 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 RNU6-769P-201ENST00000384407 104 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 RNU2-15P-201ENST00000410692 191 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AL672296.1-201ENST00000427780 2158 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 PSMA6P3-201ENST00000428242 164 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 RPL7P52-201ENST00000449200 742 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 MTND5P29-201ENST00000458676 1807 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC004062.1-201ENST00000509926 645 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC109464.2-201ENST00000510242 943 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 RNU6-405P-201ENST00000516637 110 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC018630.1-201ENST00000541376 925 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC087481.2-201ENST00000565492 330 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AC011468.4-201ENST00000603942 409 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 YPEL5P2-201ENST00000605553 359 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 AL732618.1-201ENST00000623251 301 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 CRYM-AS1-204ENST00000637983 556 ntBASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CDK11AQ9UQ88 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 RNU6-50P-201ENST00000362356 103 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 Y_RNA.517-201ENST00000384551 106 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 HMGN1P14-201ENST00000412459 517 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AL356583.2-201ENST00000426536 280 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 RSU1P2-202ENST00000437884 485 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AL033528.1-201ENST00000453780 140 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AC099563.1-201ENST00000456086 418 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 snoU109.1-201ENST00000459339 135 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 SNORD42A-201ENST00000459584 64 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AC006390.1-201ENST00000508068 283 ntBASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.6□□□□□ -1.51
CDK11AQ9UQ88 AC090615.1-201ENST00000577519 154 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms