Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDZRN3Q9UPQ7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 MFSD8-216ENST00000641147 4009 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC090740.1-201ENST00000623193 2262 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 OR4G2P-202ENST00000641004 1759 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 MAPK10-338ENST00000641647 3362 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 RN7SKP153-201ENST00000365026 316 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 SNORA62-201ENST00000365493 153 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC233981.1-201ENST00000423224 461 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 RPL23AP25-201ENST00000430973 463 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 ELOCP18-201ENST00000434209 337 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 NOTCH2P1-201ENST00000443481 624 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 OR2AQ1P-201ENST00000451972 200 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC116533.1-201ENST00000459748 321 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 RN7SL385P-201ENST00000468873 276 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC022133.1-201ENST00000490961 571 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 DEFB109D-201ENST00000529497 240 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC008814.1-201ENST00000603797 406 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC011155.2-201ENST00000623202 216 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 AC091895.1-201ENST00000624494 256 ntBASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDZRN3Q9UPQ7 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AC093849.1-201ENST00000563631 2209 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 MAPK10-263ENST00000641052 4307 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AC079741.1-201ENST00000321498 212 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 snoU2_19.2-201ENST00000363024 80 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 Y_RNA.497-201ENST00000384447 98 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-658P-201ENST00000384606 106 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-130P-201ENST00000411112 103 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AL158071.1-201ENST00000430315 461 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 RPL36AP15-201ENST00000444514 266 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 RPS15AP17-201ENST00000470598 390 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 RN7SL244P-201ENST00000493405 297 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AC140172.1-201ENST00000502928 141 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AC111193.1-201ENST00000504097 155 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 RNU2-31P-201ENST00000516954 155 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AC109446.1-201ENST00000566172 220 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 MIR4691-201ENST00000583764 85 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AL390123.1-201ENST00000603216 237 ntBASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
PDZRN3Q9UPQ7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 RN7SKP113-201ENST00000363891 295 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-1325P-201ENST00000364905 105 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 RNA5SP455-201ENST00000365190 119 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 RNU6-95P-201ENST00000384697 107 ntBASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.53□□□□□ -1.36
PDZRN3Q9UPQ7 AC096632.1-201ENST00000427395 310 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 367.5 ms