Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL445264.1-201ENST00000621719 171 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AL365361.1-201ENST00000566942 3481 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AL672167.1-206ENST00000356293 943 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 SNORD113-6-201ENST00000363345 75 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RNU6-1214P-201ENST00000363650 109 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RNU6-55P-201ENST00000411092 107 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RNU6-954P-201ENST00000411355 107 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 MTCYBP45-201ENST00000435243 565 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 MTCYBP34-201ENST00000439552 670 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 HSPE1P6-201ENST00000479457 291 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RNA5SP468-201ENST00000516782 93 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 EEF1A1P37-201ENST00000522748 715 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AC004853.1-201ENST00000604902 698 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 AP000676.4-201ENST00000624659 623 ntBASIC5.77□□□□□ -1.49
SHROOM4Q9ULL8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 MAPK10-373ENST00000641983 6772 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 RNU6-462P-201ENST00000362659 105 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 RNU6-851P-201ENST00000384565 107 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 BX679664.1-201ENST00000434429 253 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 RPS3P1-201ENST00000456781 192 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 AC114967.1-201ENST00000504890 259 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 AC021146.1-201ENST00000511202 716 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 OR6C7P-201ENST00000547875 934 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 AC091515.1-201ENST00000548110 679 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 AL365503.1-201ENST00000605247 905 ntBASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.76□□□□□ -1.49
SHROOM4Q9ULL8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 RNU6-173P-201ENST00000364215 104 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC104563.1-201ENST00000476147 376 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC096751.1-202ENST00000502691 1067 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 NDUFB4P9-201ENST00000511646 388 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC024589.1-201ENST00000512207 263 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AC114781.4-201ENST00000513707 639 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 SNORA31.8-201ENST00000516327 108 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 MRPS36P3-201ENST00000519284 130 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 MIR4999-201ENST00000585029 91 ntBASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC5.75□□□□□ -1.49
SHROOM4Q9ULL8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 MIR320C1-201ENST00000408566 88 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 AC002381.1-201ENST00000447049 280 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 VWA8P1-201ENST00000510889 176 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 RNU4-29P-201ENST00000515943 174 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 COX6CP8-201ENST00000522620 226 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 ZNF192P1-203ENST00000565888 810 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 MIR4524B-201ENST00000581569 115 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 AC024153.1-201ENST00000603103 365 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 AL355816.2-201ENST00000610049 647 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 AC079395.3-201ENST00000615161 484 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 ZNF542P-204ENST00000482727 1305 ntBASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SHROOM4Q9ULL8 MIR22-201ENST00000362190 85 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 SNORA18.3-201ENST00000384122 132 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 RPL30P2-201ENST00000414021 291 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 MTCO1P39-201ENST00000426148 480 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC022018.1-201ENST00000430685 241 ntBASIC5.73□□□□□ -1.49
SHROOM4Q9ULL8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms