Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC037471.2-201ENST00000564941 598 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AL590392.1-201ENST00000604960 446 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AL589994.2-201ENST00000621124 579 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AC018529.3-201ENST00000624212 2254 ntBASIC5.22□□□□□ -1.57
DDX41Q9UJV9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
DDX41Q9UJV9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
DDX41Q9UJV9 AL133243.3-201ENST00000617415 3004 ntBASIC5.21□□□□□ -1.57
DDX41Q9UJV9 AC025031.4-201ENST00000621248 3271 ntBASIC5.21□□□□□ -1.57
DDX41Q9UJV9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
DDX41Q9UJV9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
DDX41Q9UJV9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 API5P2-201ENST00000397055 1498 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AL139276.1-201ENST00000311910 1001 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RNU4-66P-201ENST00000365199 138 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RNU6-1074P-201ENST00000383995 104 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 SNORA32.2-201ENST00000384049 122 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RNU6-882P-201ENST00000391025 103 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RN7SKP32-201ENST00000410167 303 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC114491.1-201ENST00000416095 246 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 PPP1R11P2-201ENST00000423543 382 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 CYCSP43-201ENST00000438233 310 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RPS11P1-201ENST00000451072 473 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC007547.1-201ENST00000462177 490 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC011276.1-201ENST00000469688 323 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RPS26P28-201ENST00000470806 348 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RPL21P99-201ENST00000480369 423 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC092436.1-201ENST00000506450 503 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC108078.2-201ENST00000510750 236 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RN7SKP122-201ENST00000515923 296 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RNA5SP154-201ENST00000516193 111 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 RNU6-840P-201ENST00000517275 65 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AP005435.4-201ENST00000529514 284 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 CBX3P7-201ENST00000532876 502 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC087477.6-201ENST00000559595 843 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 XIAPP1-201ENST00000603162 600 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC008638.3-201ENST00000603341 463 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AL023881.1-201ENST00000621088 301 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC011155.2-201ENST00000623202 216 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 MIR6830-201ENST00000636015 70 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AL391684.1-202ENST00000641293 1636 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
DDX41Q9UJV9 AC139769.1-204ENST00000472297 1931 ntBASIC5.21□□□□□ -1.58
DDX41Q9UJV9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 SNORD115-7-201ENST00000365306 82 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 U3.15-201ENST00000365398 212 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 RNU6-61P-201ENST00000365528 109 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 RPL7AP25-201ENST00000423357 805 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 RSL24D1P6-201ENST00000426934 401 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC004938.1-201ENST00000438468 308 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC092001.1-201ENST00000453012 261 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 SNORD108-201ENST00000459332 71 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC103987.1-201ENST00000473394 348 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 VN1R104P-201ENST00000505115 1009 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 BTF3P12-201ENST00000519620 469 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 SUMO2P20-201ENST00000520803 283 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 PSMA2P1-201ENST00000526365 646 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AP000827.1-201ENST00000527814 258 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.2□□□□□ -1.58
DDX41Q9UJV9 GLYCAM1-201ENST00000546596 285 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 OR4H12P-201ENST00000556269 907 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC005668.1-201ENST00000571142 476 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 HMGN2P28-201ENST00000606102 262 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC009233.1-201ENST00000616477 371 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AC009248.2-201ENST00000619826 254 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 AP005019.3-201ENST00000620418 560 ntBASIC5.2□□□□□ -1.58
DDX41Q9UJV9 OR52H1-202ENST00000641796 1061 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms