Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC025750.2-201ENST00000442609 450 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 PSPHP1-201ENST00000450062 261 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 RPL23AP41-201ENST00000484754 458 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 RNU4-29P-201ENST00000515943 174 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 IGKV3-31-201ENST00000523109 329 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 COX6CP5-201ENST00000527162 228 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AC090897.2-201ENST00000581715 130 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 MIR3616-201ENST00000584070 92 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 SNRPGP19-201ENST00000603826 189 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AP004247.3-201ENST00000608682 624 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AL158801.5-201ENST00000623123 465 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AC027309.3-201ENST00000623419 351 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AC091932.3-201ENST00000624223 323 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 AP001002.2-201ENST00000625137 386 ntBASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COMMD3Q9UBI1 ZNF90P1-201ENST00000480493 1951 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 CYCSP45-201ENST00000402289 315 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 ATF1P1-201ENST00000406040 927 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 BTF3P7-201ENST00000407097 488 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 AC097499.1-201ENST00000444277 208 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 AC097493.1-201ENST00000463958 372 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 MTAPP1-201ENST00000489154 819 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 RPS29P20-201ENST00000489592 171 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 SNORA26.10-201ENST00000516427 141 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 OR4V1P-201ENST00000525394 1140 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 HSPE1P3-201ENST00000559254 309 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 AC006386.2-201ENST00000624491 75 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 AC012005.1-201ENST00000624575 75 ntBASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COMMD3Q9UBI1 Y_RNA.333-201ENST00000365274 102 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 SNORA36C-201ENST00000384289 132 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 RNU2-20P-201ENST00000410425 191 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC096664.2-201ENST00000411843 406 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 NPM1P11-201ENST00000417106 855 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC234781.2-201ENST00000426370 994 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 WASF1P1-201ENST00000447560 1131 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 MRPL35P4-201ENST00000453682 566 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 BX248409.1-201ENST00000455497 255 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC087588.1-201ENST00000462203 316 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC128713.1-201ENST00000471495 306 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 SNORA31.18-201ENST00000517043 134 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC023824.2-201ENST00000566185 400 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 LARP7P3-201ENST00000579888 337 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC007938.3-201ENST00000604965 623 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 KATNBL1P1-201ENST00000605192 748 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AL513477.2-201ENST00000607858 568 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AP005137.2-201ENST00000609238 400 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AC079395.3-201ENST00000615161 484 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 OR1S1-201ENST00000624470 978 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 MTND5P6-201ENST00000422338 1798 ntBASIC1.67□□□□□ -2.14
COMMD3Q9UBI1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 RNA5SP387-201ENST00000364226 106 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 U3.20-201ENST00000390909 217 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AL358075.3-201ENST00000426289 226 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 RPL7L1P10-201ENST00000427790 463 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 ARPC3P1-201ENST00000437218 533 ntBASIC1.66□□□□□ -2.14
COMMD3Q9UBI1 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms