Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 SNRPEP2-201ENST00000397592 279 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 CYCSP46-201ENST00000423569 204 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 MTCO1P19-201ENST00000443487 500 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 RPL23AP35-201ENST00000451906 501 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 HMGN3P1-201ENST00000453847 193 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AL136126.1-201ENST00000473603 402 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 RPL23AP11-201ENST00000475260 469 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC068724.1-201ENST00000487100 792 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC010424.1-201ENST00000506336 297 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC005921.1-201ENST00000510589 286 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 MTCO2P32-201ENST00000514865 403 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC010928.3-201ENST00000587712 541 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 OR4G1P-201ENST00000588632 938 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 CKS1BP3-201ENST00000600888 237 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC092354.1-201ENST00000606057 376 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 RN7SKP299-201ENST00000606679 301 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC138932.5-201ENST00000617759 563 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC098679.4-201ENST00000624241 654 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RNU6-343P-201ENST00000364709 104 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RNA5SP88-201ENST00000365560 109 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RNU6-1122P-201ENST00000384449 107 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 DHFRP6-201ENST00000401776 268 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 HSPE1P26-201ENST00000405341 275 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AL138880.1-201ENST00000405824 642 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RPL31P2-201ENST00000413849 377 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 MTCYBP39-201ENST00000437562 491 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC092427.1-201ENST00000439177 601 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC016696.1-201ENST00000446949 318 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 VN1R10P-201ENST00000447106 875 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC104073.1-201ENST00000451988 151 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 MTCO3P2-201ENST00000457365 171 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 SNORA84-201ENST00000459229 133 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RPL21P10-201ENST00000463521 490 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RPS15AP17-201ENST00000470598 390 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RPS29P2-201ENST00000479278 136 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 TMEM251P1-201ENST00000503717 318 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC006504.3-201ENST00000586818 523 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC073544.2-201ENST00000601155 540 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC103591.3-201ENST00000608684 209 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC100793.4-201ENST00000613683 429 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AL356596.1-201ENST00000624230 379 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC034229.5-201ENST00000624258 185 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AC079228.1-201ENST00000624774 1049 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 MIR622-201ENST00000638396 96 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 AL157700.1-201ENST00000561973 1432 ntBASIC3.67□□□□□ -1.82
UPF2Q9HAU5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
UPF2Q9HAU5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 SNORA51.6-201ENST00000384151 125 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 RNU6-1226P-201ENST00000384317 107 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 Y_RNA.553-201ENST00000384670 102 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 SNORD67-201ENST00000390833 111 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AL121972.1-201ENST00000402023 252 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 RN7SKP27-201ENST00000410684 333 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms