Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC018638.8-201ENST00000588755 281 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC093227.2-201ENST00000589357 285 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL669831.4-202ENST00000590817 238 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL031176.1-201ENST00000604554 466 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL158211.4-201ENST00000606988 584 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 LINC00901.1-201ENST00000617252 152 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC244100.1-202ENST00000621554 382 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AC010338.1-201ENST00000621823 717 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 MTCO1P9-201ENST00000505577 1534 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 Z73965.1-201ENST00000623412 2297 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 AL133243.3-201ENST00000617415 3004 ntBASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.03□□□□□ -1.76
AMBRA1Q9C0C7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.77
AMBRA1Q9C0C7 MFSD8-242ENST00000641690 4199 ntBASIC4.03□□□□□ -1.77
AMBRA1Q9C0C7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 NACAP2-201ENST00000318548 624 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 Y_RNA.157-201ENST00000363638 102 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-996P-201ENST00000365438 107 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-754P-201ENST00000391166 107 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC092447.6-201ENST00000414578 210 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 OR4K11P-201ENST00000431829 904 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 RPL23AP33-201ENST00000442301 452 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 CACYBPP2-201ENST00000453625 678 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 FGF7P3-201ENST00000454645 303 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 RPL35AP15-201ENST00000468042 339 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC109327.1-201ENST00000471666 403 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC126389.1-201ENST00000477436 290 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC233702.1-201ENST00000482905 502 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 HMGN1P28-201ENST00000521340 364 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 OR5BN1P-201ENST00000532955 829 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 DYNLL1P4-201ENST00000549314 266 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AL352979.3-201ENST00000553515 247 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 OR4K8P-201ENST00000578842 1048 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC069061.3-201ENST00000582254 823 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AP003117.2-201ENST00000606010 545 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC064801.1-201ENST00000612025 407 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC093838.1-201ENST00000613014 469 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AL136313.1-201ENST00000624804 202 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 AC092326.2-201ENST00000624772 1561 ntBASIC4.02□□□□□ -1.77
AMBRA1Q9C0C7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC018529.3-201ENST00000624212 2254 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 HSPE1P11-201ENST00000339579 310 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 Y_RNA.22-201ENST00000362492 102 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-511P-201ENST00000363496 107 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 Y_RNA.813-201ENST00000364639 102 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 Y_RNA.367-201ENST00000365544 101 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-637P-201ENST00000384050 107 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-767P-201ENST00000384132 107 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RNU6-432P-201ENST00000384196 109 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 MIR3065-201ENST00000390137 79 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC097374.1-203ENST00000400783 485 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RNU4-25P-201ENST00000410569 230 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RNU4-78P-201ENST00000410940 126 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AL139095.3-201ENST00000419672 1203 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 AL391219.1-201ENST00000422570 483 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 RPL23AP38-201ENST00000423801 469 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 OR2AS1P-201ENST00000427827 319 ntBASIC4.01□□□□□ -1.77
AMBRA1Q9C0C7 MED13P1-201ENST00000428342 171 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms