Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 PHF2P2-202ENST00000444553 2865 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 AC108099.1-201ENST00000564402 3258 ntBASIC4.12□□□□□ -1.75
KRTAP3-3Q9BYR6 LRRC37A11P-202ENST00000579258 3717 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 IGFL3-201ENST00000341415 662 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 CST9LP1-201ENST00000376987 444 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 CD24P4-201ENST00000382840 243 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU6-154P-201ENST00000384306 106 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 RNU6-1321P-201ENST00000390905 107 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AL512430.3-201ENST00000405355 441 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SKP194-201ENST00000411328 351 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 Z83841.1-201ENST00000433173 968 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL724P-201ENST00000461895 271 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC018638.2-201ENST00000471258 403 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC106707.2-201ENST00000484182 374 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 SEM1P1-201ENST00000506694 209 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 SNORA4.4-201ENST00000515921 135 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC091980.1-201ENST00000524262 288 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC073913.2-201ENST00000541512 145 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC005841.1-201ENST00000547042 287 ntTSL 3 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC079598.5-201ENST00000547460 117 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 HSPE1P5-201ENST00000561489 272 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC034105.5-201ENST00000564017 314 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 LINC02124-201ENST00000570087 484 ntTSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 HMGN2P15-201ENST00000585707 270 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 RN7SL726P-201ENST00000605957 299 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 Metazoa_SRP.101-201ENST00000611704 303 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 uc_338.2-201ENST00000612963 182 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 MAPK10-287ENST00000641217 3037 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ICE2P2-201ENST00000483823 2787 ntBASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 KALRN-211ENST00000460856 6509 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRTAP3-3Q9BYR6 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRTAP3-3Q9BYR6 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms