Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.09□□□□□ -1.75
VRK1Q99986 AC015813.4-201ENST00000610469 179 ntBASIC4.09□□□□□ -1.75
VRK1Q99986 AC007998.5-201ENST00000622938 237 ntBASIC4.09□□□□□ -1.75
VRK1Q99986 AC011155.2-201ENST00000623202 216 ntBASIC4.09□□□□□ -1.75
VRK1Q99986 AC025034.2-201ENST00000623264 286 ntBASIC4.09□□□□□ -1.75
VRK1Q99986 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VRK1Q99986 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.09□□□□□ -1.75
VRK1Q99986 AC009643.2-201ENST00000603543 1448 ntBASIC4.09□□□□□ -1.75
VRK1Q99986 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VRK1Q99986 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VRK1Q99986 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VRK1Q99986 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VRK1Q99986 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
VRK1Q99986 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
VRK1Q99986 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
VRK1Q99986 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK1Q99986 XIAPP3-201ENST00000312918 795 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 NACAP2-201ENST00000318548 624 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 MIR448-201ENST00000362131 111 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 Y_RNA.72-201ENST00000362894 103 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNU6-173P-201ENST00000364215 104 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 SMIM11P1-201ENST00000369586 178 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNU6-1029P-201ENST00000384109 107 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNU1-82P-201ENST00000390851 165 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNU6-903P-201ENST00000391270 109 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 RNA5SP345-201ENST00000410646 108 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNU6-193P-201ENST00000410977 107 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RSU1P3-201ENST00000412878 835 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.08□□□□□ -1.76
VRK1Q99986 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 SRIP2-201ENST00000428470 166 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK1Q99986 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AL451139.1-201ENST00000434718 346 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.08□□□□□ -1.76
VRK1Q99986 SDAD1P2-201ENST00000441308 2028 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 RPS29P15-201ENST00000458329 171 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 RPS17P2-201ENST00000461663 408 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC010285.1-201ENST00000470580 392 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 AC078817.1-201ENST00000492623 435 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 CEACAMP10-202ENST00000495431 496 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK1Q99986 RNU6-390P-201ENST00000516259 103 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNU1-6P-201ENST00000516290 144 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNA5SP392-201ENST00000516905 112 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNA5SP503-201ENST00000517047 117 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RNU6-709P-201ENST00000517257 104 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 RN7SKP92-201ENST00000517266 244 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 SUB1P1-201ENST00000524415 382 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK1Q99986 OR5B19P-201ENST00000531766 928 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.08□□□□□ -1.76
VRK1Q99986 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.08□□□□□ -1.76
VRK1Q99986 MIR4703-201ENST00000577728 79 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 FAM60BP-201ENST00000578364 658 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 UBE2V2P2-201ENST00000587677 504 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 AC008945.2-201ENST00000606056 604 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VRK1Q99986 SDR42E1P2-201ENST00000614861 481 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC063943.3-201ENST00000615562 356 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC010133.1-201ENST00000615809 842 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC104260.1-201ENST00000616660 539 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC108467.2-201ENST00000617640 1597 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.08□□□□□ -1.76
VRK1Q99986 AL360181.4-201ENST00000621752 134 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 AC092326.2-201ENST00000624772 1561 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 U6.114-201ENST00000636407 96 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VRK1Q99986 AC103710.2-202ENST00000641454 2853 ntBASIC4.08□□□□□ -1.76
VRK1Q99986 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VRK1Q99986 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.07□□□□□ -1.76
VRK1Q99986 AC008725.1-201ENST00000605123 2263 ntBASIC4.07□□□□□ -1.76
VRK1Q99986 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.07□□□□□ -1.76
VRK1Q99986 AL442639.1-201ENST00000625030 1899 ntBASIC4.07□□□□□ -1.76
VRK1Q99986 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VRK1Q99986 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VRK1Q99986 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VRK1Q99986 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
VRK1Q99986 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
VRK1Q99986 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
VRK1Q99986 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.07□□□□□ -1.76
VRK1Q99986 RNU1-108P-201ENST00000362556 161 ntBASIC4.07□□□□□ -1.76
VRK1Q99986 RNU6-552P-201ENST00000362869 119 ntBASIC4.07□□□□□ -1.76
VRK1Q99986 Y_RNA.70-201ENST00000362886 110 ntBASIC4.07□□□□□ -1.76
VRK1Q99986 SNORD115-7-201ENST00000365306 82 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms