Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC026801.1-201ENST00000497178 464 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 Y_RNA.670-201ENST00000516255 105 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AC087854.1-201ENST00000519706 414 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 PRPF19P1-201ENST00000584766 898 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AL109918.3-201ENST00000603072 338 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 FAM27B-201ENST00000610601 213 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 AL732372.2-225ENST00000642124 456 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 MTCO1P24-201ENST00000515438 1558 ntBASIC6.09□□□□□ -1.43
CCDC85AQ96PX6 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC85AQ96PX6 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
CCDC85AQ96PX6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 Y_RNA.152-201ENST00000363578 100 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 Y_RNA.404-201ENST00000383978 102 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RNU6-637P-201ENST00000384050 107 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RNU6-434P-201ENST00000384376 107 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 Y_RNA.496-201ENST00000384444 101 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 SNORD70.1-201ENST00000391007 85 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RNU6-1109P-201ENST00000391187 107 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 USMG5P1-201ENST00000425964 177 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AC016712.1-201ENST00000431088 378 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 CEACAMP6-201ENST00000452007 574 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RPS17P2-201ENST00000461663 408 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RN7SL441P-201ENST00000492388 296 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RNU6-388P-201ENST00000517012 105 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RNU6-389P-201ENST00000517048 105 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 DEFB108D-201ENST00000527787 222 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AC007566.2-201ENST00000603642 413 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AC020634.1-201ENST00000608701 549 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 U2.1-201ENST00000618978 145 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 MIR7641-1-201ENST00000627518 61 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AC008758.3-201ENST00000507003 1829 ntBASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.08□□□□□ -1.44
CCDC85AQ96PX6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC026523.2-201ENST00000625039 7739 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 RNU6-393P-201ENST00000384475 107 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 SNORA48.4-201ENST00000391089 134 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 Y_RNA.645-201ENST00000391229 102 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 RN7SKP16-201ENST00000410180 299 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 RNU2-47P-201ENST00000410649 186 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC053481.1-201ENST00000467217 306 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 CEACAMP10-202ENST00000495431 496 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC021146.3-201ENST00000511911 260 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 SETP7-201ENST00000552169 453 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC005899.2-201ENST00000584353 90 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC104687.2-201ENST00000604442 342 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC018889.1-201ENST00000605372 397 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 MIR6758-201ENST00000620653 63 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AL022311.1-201ENST00000623726 19416 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 AP001029.2-203ENST00000589795 4910 ntBASIC6.07□□□□□ -1.44
CCDC85AQ96PX6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC104118.1-201ENST00000607625 1589 ntBASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC85AQ96PX6 AC108751.5-201ENST00000492880 1336 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms