Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SYNGAP1Q96PV0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 ZNF137P-201ENST00000456718 1920 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 MIR634-201ENST00000385208 97 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 GNG5P5-201ENST00000420444 220 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 RPL21P89-201ENST00000444021 467 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC079168.2-201ENST00000453977 416 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 RPL7P43-201ENST00000478876 753 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 RPL36AP41-201ENST00000493820 306 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AL139099.1-201ENST00000497398 403 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 RPS27AP18-201ENST00000515536 459 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-256P-201ENST00000516747 97 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-794P-201ENST00000517261 64 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 HMGB1P19-201ENST00000517578 577 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 FAM60DP-201ENST00000524174 632 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AP000859.1-201ENST00000525536 307 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AP001781.1-201ENST00000530977 207 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC005868.1-201ENST00000536421 331 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AL670379.11-201ENST00000604059 253 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC025588.3-201ENST00000604182 274 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AL670379.10-201ENST00000604330 253 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC104662.1-201ENST00000604448 511 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AL670379.12-201ENST00000605291 253 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AL670379.9-201ENST00000605428 253 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 DUSP12P1-201ENST00000612874 516 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 AC112200.1-201ENST00000625015 234 ntBASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SYNGAP1Q96PV0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 OR51H2P-202ENST00000641424 3046 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 RN7SKP280-201ENST00000364196 304 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 SNORA71.2-201ENST00000364941 134 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-985P-201ENST00000410182 104 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 Y_RNA.618-201ENST00000410949 107 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 CRYBB2P1-203ENST00000415709 538 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 CBX3P6-201ENST00000430257 527 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AL035666.1-201ENST00000446195 348 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC020550.1-201ENST00000447385 163 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 RNU6-764P-201ENST00000516396 105 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 RN7SKP83-201ENST00000516512 178 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AL133271.1-201ENST00000538229 291 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 MIR3672-201ENST00000584290 82 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC073539.2-201ENST00000597113 165 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC023813.4-201ENST00000607580 580 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 ZYXP1-201ENST00000617638 118 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 U4.1-201ENST00000620349 87 ntBASIC5.34□□□□□ -1.55
SYNGAP1Q96PV0 AC011155.2-201ENST00000623202 216 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms