Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU2-21P-201ENST00000410368 188 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RNU2-50P-201ENST00000410494 143 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL133482.1-201ENST00000415988 498 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL451062.2-201ENST00000427515 271 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC004129.2-201ENST00000457229 287 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC016925.1-201ENST00000458303 298 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RNU7-138P-201ENST00000459479 64 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 HMGB1P25-201ENST00000468402 607 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RN7SL41P-201ENST00000476144 297 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 SRI-210ENST00000490437 570 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RPS17P5-201ENST00000498293 408 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC097462.2-201ENST00000504623 481 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 TRAPPC2P7-201ENST00000509650 231 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RNU6-496P-201ENST00000516145 99 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC139365.2-201ENST00000517972 253 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 MRPS21P7-201ENST00000566937 238 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RPL7P50-201ENST00000600588 727 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL158827.2-201ENST00000602494 330 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL359881.1-201ENST00000602916 267 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 MIR7703-201ENST00000620784 77 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AL691447.3-201ENST00000635020 330 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC114947.2-201ENST00000565748 2125 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC007785.2-201ENST00000598627 1916 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC008758.3-201ENST00000507003 1829 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 AC110373.1-201ENST00000505994 3505 ntBASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CNTNAP3BQ96NU0 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL031119.1-201ENST00000404707 1879 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL591135.1-201ENST00000401578 5914 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 Y_RNA.143-201ENST00000363520 106 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 RNU6-1284P-201ENST00000363701 100 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 Y_RNA.400-201ENST00000383963 111 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 RNA5SP87-201ENST00000384155 118 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 SNORD51-201ENST00000384320 80 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 U3.29-201ENST00000391296 212 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 RPS4XP7-201ENST00000406274 780 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 RNU2-52P-201ENST00000410680 190 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 RNU5E-9P-201ENST00000411164 104 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AC007098.1-201ENST00000420122 367 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AC108075.1-201ENST00000424692 529 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AP001324.2-201ENST00000461163 319 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 RN7SL432P-201ENST00000484057 298 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 SCARNA13-201ENST00000516672 275 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 SYF2P1-201ENST00000550658 413 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL670379.6-201ENST00000603753 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL670379.1-201ENST00000604752 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL590392.1-201ENST00000604960 446 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL670379.5-201ENST00000605253 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL670379.8-201ENST00000605353 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AL670379.7-201ENST00000605823 252 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 AC116447.1-201ENST00000613153 453 ntBASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.47□□□□□ -1.53
CNTNAP3BQ96NU0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.46□□□□□ -1.53
CNTNAP3BQ96NU0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
CNTNAP3BQ96NU0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
CNTNAP3BQ96NU0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 RNU105B-201ENST00000364478 208 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 Y_RNA.272-201ENST00000364696 102 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 RNA5SP131-201ENST00000365452 119 ntBASIC5.46□□□□□ -1.54
CNTNAP3BQ96NU0 GNG5P2-201ENST00000372054 207 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms