Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC138Q96M89 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC138Q96M89 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC138Q96M89 AF127577.6-201ENST00000623352 2191 ntBASIC4.06□□□□□ -1.76
CCDC138Q96M89 AL353746.1-201ENST00000566293 6881 ntBASIC4.06□□□□□ -1.76
CCDC138Q96M89 MAPK10-373ENST00000641983 6772 ntBASIC4.06□□□□□ -1.76
CCDC138Q96M89 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC138Q96M89 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 HSPA8P1-201ENST00000425843 1833 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 MIR383-201ENST00000362257 73 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 RNU5A-6P-201ENST00000384136 116 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 Y_RNA.582-201ENST00000391023 95 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 NDUFB4P7-201ENST00000423198 363 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 USP9YP36-201ENST00000424581 829 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 NUTF2P3-201ENST00000448540 384 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 SNORD97-201ENST00000459187 142 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 RPS23P7-201ENST00000466210 444 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 SNRPGP3-201ENST00000469405 227 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 RPL31P60-201ENST00000478450 367 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AF213884.1-201ENST00000488102 463 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 KCTD9P5-201ENST00000504141 1170 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 NARSP2-201ENST00000518524 679 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 MIR3167-201ENST00000579623 85 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 AL590392.1-201ENST00000604960 446 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC138Q96M89 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC138Q96M89 MAPK10-372ENST00000641954 3413 ntBASIC4.05□□□□□ -1.76
CCDC138Q96M89 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC138Q96M89 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC138Q96M89 OR4G2P-202ENST00000641004 1759 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 MIR493-201ENST00000385254 89 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 RN7SKP140-201ENST00000411196 284 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 RHEBP3-201ENST00000411920 351 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 MTND3P17-201ENST00000416968 344 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 AL159169.1-201ENST00000421119 127 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 RPL31P35-201ENST00000431058 377 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 GAPDHP27-201ENST00000447427 1020 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AL162151.2-201ENST00000448875 158 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 TPT1P12-201ENST00000448968 492 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC006480.1-201ENST00000449887 378 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 AL359385.1-201ENST00000456509 365 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 RPS27AP13-201ENST00000498403 237 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 NDUFB4P9-201ENST00000511646 388 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 SCARNA15.2-201ENST00000516409 127 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC022616.3-201ENST00000523940 148 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC022968.1-201ENST00000567372 442 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC068790.2-201ENST00000602601 557 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 MIR8059-201ENST00000620427 81 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 AL392088.2-201ENST00000637607 285 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC138Q96M89 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC138Q96M89 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCDC138Q96M89 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.04□□□□□ -1.76
CCDC138Q96M89 AC090740.1-201ENST00000623193 2262 ntBASIC4.04□□□□□ -1.76
CCDC138Q96M89 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CCDC138Q96M89 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CCDC138Q96M89 LARP1BP1-201ENST00000506036 1359 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms