Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 RPL7P26-201ENST00000333817 754 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RNU6-582P-201ENST00000362989 107 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RNA5SP167-201ENST00000365461 116 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 RNA5SP372-201ENST00000390836 115 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RNU6-308P-201ENST00000390957 107 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RNA5SP171-201ENST00000391071 115 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 MIR548F4-201ENST00000408515 105 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 NDUFB4P5-201ENST00000415445 361 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 BOLA3P4-201ENST00000418151 400 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 SKP1P1-201ENST00000438081 489 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 LSM1P1-201ENST00000438629 273 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RPL17P49-201ENST00000443728 411 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 Z95327.1-201ENST00000446082 482 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AL162151.2-201ENST00000448875 158 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 PPIAP3-201ENST00000450588 505 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 SLC31A1P1-201ENST00000451221 567 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 CECR9-201ENST00000453421 199 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RNU6-329P-201ENST00000459618 107 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 MRPS17P3-201ENST00000465453 385 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC010655.3-201ENST00000478818 450 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RPL21P103-201ENST00000479921 488 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 POU5F1P7-201ENST00000508759 541 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC099522.1-202ENST00000514718 367 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 MTCO2P24-201ENST00000515611 426 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 RNU4-49P-201ENST00000516080 140 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 Y_RNA.718-201ENST00000517110 102 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC023632.4-201ENST00000517783 191 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC090281.1-201ENST00000523019 276 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AP003122.3-201ENST00000526316 255 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC068587.4-201ENST00000533893 186 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 MIR4444-1-201ENST00000581696 74 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 MIR4444-2-201ENST00000584390 74 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC010525.2-201ENST00000590920 195 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC010591.1-201ENST00000603941 649 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC008966.2-201ENST00000606157 453 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 MIR98-201ENST00000606724 119 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC092807.2-201ENST00000609367 243 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 HMGB1P24-202ENST00000615653 685 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC091905.2-201ENST00000623143 306 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 MTND4LP32-201ENST00000636111 270 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 AC008013.2-202ENST00000637965 364 ntBASIC4.4□□□□□ -1.71
CHFRQ96EP1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CHFRQ96EP1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHFRQ96EP1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 RLIMP1-201ENST00000339626 1680 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHFRQ96EP1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHFRQ96EP1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 AC067945.1-201ENST00000342609 618 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 RNU1-85P-201ENST00000364127 164 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 RNU6-777P-201ENST00000364265 104 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 RNA5SP146-201ENST00000410743 123 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 MTATP6P18-201ENST00000417994 673 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 OR51AB1P-201ENST00000429046 620 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 MTCO1P27-201ENST00000448269 226 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 AL162395.1-201ENST00000457882 422 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHFRQ96EP1 RN7SL817P-201ENST00000480777 288 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 PCBP2P3-201ENST00000509726 843 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 VWA8P1-201ENST00000510889 176 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 RNU6-583P-201ENST00000516012 92 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 SNORA40.12-201ENST00000516329 111 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 RN7SKP256-201ENST00000517201 314 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 AC113194.1-201ENST00000606037 500 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 AL161734.1-201ENST00000609720 557 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 AC006133.1-201ENST00000617106 264 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 MIR6875-201ENST00000617506 72 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms