Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC074029.2-201ENST00000551045 634 ntBASIC0.78□□□□□ -2.29
SYNE2Q8WXH0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC0.78□□□□□ -2.29
SYNE2Q8WXH0 AP000676.4-201ENST00000624659 623 ntBASIC0.78□□□□□ -2.29
SYNE2Q8WXH0 MIR198-201ENST00000637333 62 ntBASIC0.78□□□□□ -2.29
SYNE2Q8WXH0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 MRPL50P4-201ENST00000446432 475 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC103810.1-201ENST00000579873 453 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 HPVC1-201ENST00000629899 1198 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AL079343.1-201ENST00000572358 1771 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 RNU6-386P-201ENST00000362650 107 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 LINC01347-201ENST00000417964 355 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 GTF2IP12-201ENST00000456547 356 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC011979.1-201ENST00000472300 483 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC007375.1-201ENST00000554513 578 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 OR1AB1P-201ENST00000585564 761 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AL353770.2-201ENST00000620024 78 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 MTND5P19-201ENST00000424872 1794 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 SNORD56.3-201ENST00000363507 71 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 Y_RNA.170-201ENST00000363746 110 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 RNA5SP107-201ENST00000411358 122 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 CBX3P7-201ENST00000532876 502 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 MTND4LP24-201ENST00000572277 291 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 RNU1-93P-201ENST00000364704 169 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 Z98941.1-201ENST00000407764 100 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC008173.1-201ENST00000418901 264 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AIMP1P2-201ENST00000425294 312 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AL590762.3-201ENST00000436372 640 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC138832.1-201ENST00000522871 556 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AP004242.1-201ENST00000533701 349 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC068135.2-201ENST00000569293 1028 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 RPL23AP22-201ENST00000437556 453 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC093752.1-206ENST00000511823 336 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 OR4P1P-201ENST00000530808 1136 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 HMGB1P50-201ENST00000605814 607 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 MIR6766-201ENST00000622641 72 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 AC073348.1-201ENST00000623002 331 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 PABPC1P9-201ENST00000426076 1612 ntBASIC0.77□□□□□ -2.29
SYNE2Q8WXH0 RNU1-35P-201ENST00000362782 153 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 RNU6-564P-201ENST00000410983 104 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AL030996.1-201ENST00000411430 235 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 VN1R74P-201ENST00000613259 503 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AP002907.1-201ENST00000606361 1430 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 MIR148B-201ENST00000362252 99 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 TPRKBP1-201ENST00000456243 481 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 RNU4-60P-201ENST00000517239 135 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC121758.2-201ENST00000553271 193 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC022387.2-201ENST00000604050 448 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC138473.1-201ENST00000605717 526 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 MIR601-201ENST00000385256 79 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 LAP3P1-201ENST00000403648 294 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 MIR1197-201ENST00000408818 88 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 HMGB1P16-201ENST00000447155 540 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 ST13P14-201ENST00000474095 734 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 RNY4-201ENST00000516507 96 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms