Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 AL627309.6-201ENST00000606857 840 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 AL355802.3-201ENST00000607571 545 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 BX664608.1-201ENST00000610519 487 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 Mico1.1-201ENST00000611698 204 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 MIR6780A-201ENST00000615089 68 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 AC040168.1-201ENST00000623594 991 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 AC009161.2-201ENST00000624626 138 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 AC134503.1-201ENST00000633048 54 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 AC012618.3-205ENST00000637896 1496 ntBASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
GFI1BQ5VTD9 RAD17P1-201ENST00000418130 2042 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 SNORA58B-201ENST00000364259 136 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.315-201ENST00000365117 102 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.431-201ENST00000384086 102 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 SNORD116-29-201ENST00000384516 83 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 ARF4P3-201ENST00000397387 509 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC097374.1-203ENST00000400783 485 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL133270.1-201ENST00000402635 279 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL136116.1-201ENST00000403591 381 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL590290.1-201ENST00000405336 380 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TXNP7-201ENST00000406296 293 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RNU4-14P-201ENST00000410858 122 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 Z82205.1-201ENST00000428456 297 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 CEACAMP1-201ENST00000434624 1035 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 IFNA20P-201ENST00000436840 528 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL138799.3-201ENST00000438968 350 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL772161.1-201ENST00000439130 476 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TXNP1-201ENST00000441872 371 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RPL23AP15-201ENST00000450202 459 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 DHFRP3-201ENST00000455595 559 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 Y_RNA.639-201ENST00000458981 102 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 HMGN2P26-201ENST00000463169 339 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RPL35AP15-201ENST00000468042 339 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC005741.1-201ENST00000511094 432 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TTC39CP1-201ENST00000512513 755 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RNU6-1314P-201ENST00000517139 104 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC087241.2-201ENST00000535801 324 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC084783.1-201ENST00000565846 910 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC079587.1-201ENST00000603846 277 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 Z84480.1-201ENST00000605131 311 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC024940.4-201ENST00000605507 246 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 BX323046.1-201ENST00000610145 535 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AL355472.4-201ENST00000610233 626 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC100827.5-201ENST00000615883 426 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 U6.101-201ENST00000637707 76 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 MTND4P27-201ENST00000450813 1354 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC006020.1-201ENST00000420179 1854 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 AC009951.1-201ENST00000623674 2614 ntBASIC3.2□□□□□ -1.9
GFI1BQ5VTD9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms