Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
VARS2Q5ST30 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VARS2Q5ST30 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 AC073365.1-203ENST00000641055 1992 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 RNA5SP514-201ENST00000363717 111 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 RNU6-827P-201ENST00000365553 106 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 PPIAP13-201ENST00000434706 478 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 AL590399.4-201ENST00000436561 601 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 AC073587.1-201ENST00000447093 876 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 AC109327.2-201ENST00000448339 378 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 RPS29P27-201ENST00000463711 170 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 SNORA31.3-201ENST00000516029 96 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 AC100767.1-201ENST00000528178 123 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 MIR3121-201ENST00000579680 77 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 SUMO2P15-201ENST00000604285 278 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
VARS2Q5ST30 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.37□□□□□ -1.39
VARS2Q5ST30 DDX10P1-201ENST00000448545 1933 ntBASIC6.37□□□□□ -1.39
VARS2Q5ST30 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARS2Q5ST30 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.36□□□□□ -1.39
VARS2Q5ST30 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARS2Q5ST30 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNU6-235P-201ENST00000362644 107 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNU6-640P-201ENST00000363693 105 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNA5SP500-201ENST00000364486 119 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNU6-843P-201ENST00000384454 104 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 U3.22-201ENST00000391120 215 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RPS3AP2-201ENST00000407190 754 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 AL355433.1-201ENST00000422804 300 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.36□□□□□ -1.39
VARS2Q5ST30 RANP8-201ENST00000444720 713 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RPS5P7-201ENST00000456664 608 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 snoU13.30-201ENST00000458951 104 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 AC104164.1-201ENST00000460282 590 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RN7SL352P-201ENST00000466002 277 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RPL23AP2-201ENST00000471227 466 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RN7SL57P-201ENST00000493687 290 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.36□□□□□ -1.39
VARS2Q5ST30 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNA5SP362-201ENST00000516048 118 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNU1-86P-201ENST00000516108 154 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RN7SKP164-201ENST00000516138 266 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNU1-107P-201ENST00000516617 154 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 RNU2-60P-201ENST00000517290 128 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 AC010547.6-201ENST00000571789 193 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC6.36□□□□□ -1.39
VARS2Q5ST30 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
VARS2Q5ST30 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARS2Q5ST30 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
VARS2Q5ST30 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.36□□□□□ -1.39
VARS2Q5ST30 AC009779.8-201ENST00000641684 4384 ntBASIC6.36□□□□□ -1.39
VARS2Q5ST30 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.35□□□□□ -1.39
VARS2Q5ST30 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 PARP4P2-201ENST00000446672 3326 ntBASIC6.35□□□□□ -1.39
VARS2Q5ST30 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 AK9-203ENST00000368948 2478 ntTSL 5 BASIC6.35□□□□□ -1.39
VARS2Q5ST30 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
VARS2Q5ST30 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.35□□□□□ -1.39
VARS2Q5ST30 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.35□□□□□ -1.39
VARS2Q5ST30 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
VARS2Q5ST30 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms