Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 HLA-N-201ENST00000437516 135 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC007967.1-201ENST00000455422 1159 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC110792.1-201ENST00000491826 472 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL133271.1-201ENST00000538229 291 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 CYP4A43P-201ENST00000568156 121 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC120057.2-201ENST00000571520 271 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC006504.3-201ENST00000586818 523 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 SNORA51-201ENST00000606420 132 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC009994.1-201ENST00000606889 253 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC104458.1-201ENST00000608243 463 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 Y_RNA.804-201ENST00000615262 101 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AL354798.1-201ENST00000622505 329 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 MTND5P3-201ENST00000438536 1800 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 MAPK10-253ENST00000641010 4072 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 FAM35DP-201ENST00000323387 2712 ntBASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SLC44A4Q53GD3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RNU4-1-201ENST00000363925 141 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 Y_RNA.296-201ENST00000364930 108 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 CALM2P3-201ENST00000400429 449 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC127391.1-201ENST00000411737 98 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RAB9AP3-201ENST00000412737 573 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RAB9AP1-201ENST00000449393 573 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 MTND3P10-201ENST00000450967 341 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 PRSS3P4-201ENST00000453323 162 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RPL7P49-201ENST00000471402 708 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC010587.1-201ENST00000505809 469 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC007424.1-203ENST00000554613 687 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL391840.1-201ENST00000571144 367 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL031176.1-201ENST00000604554 466 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 IGHV3-29-201ENST00000604817 344 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL590282.1-201ENST00000610379 1136 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL133173.2-201ENST00000614270 90 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL121772.2-201ENST00000614331 297 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AC136475.10-201ENST00000620253 385 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AL356585.4-201ENST00000623078 1229 ntBASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SLC44A4Q53GD3 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
SLC44A4Q53GD3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 RNU6-525P-201ENST00000363685 104 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 RNU6-1090P-201ENST00000364065 94 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 U3.15-201ENST00000365398 212 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 MIR19A-201ENST00000384878 82 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 RPL23AP32-201ENST00000395315 459 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 RPS15AP12-201ENST00000419498 388 ntBASIC4.27□□□□□ -1.73
SLC44A4Q53GD3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms