Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RN7SKP126-201ENST00000411143 300 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 CTSL3P-202ENST00000412179 788 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH1Q08174 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDH1Q08174 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDH1Q08174 AC011816.1-201ENST00000441346 546 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 AL353752.1-201ENST00000454946 260 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 RNU7-187P-201ENST00000458985 68 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 ATP5LP3-201ENST00000514223 304 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 AC131281.1-201ENST00000522984 164 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDH1Q08174 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDH1Q08174 SUB1P3-201ENST00000564581 315 ntBASIC5.05□□□□□ -1.6
PCDH1Q08174 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDH1Q08174 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDH1Q08174 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
PCDH1Q08174 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDH1Q08174 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDH1Q08174 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDH1Q08174 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDH1Q08174 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
PCDH1Q08174 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCDH1Q08174 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCDH1Q08174 RNU6-874P-201ENST00000362390 105 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 RNU6-1155P-201ENST00000363554 107 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDH1Q08174 MIR517A-201ENST00000385001 87 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 MIR1182-201ENST00000408363 97 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.04□□□□□ -1.6
PCDH1Q08174 RPS27AP12-201ENST00000429552 465 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 AL591212.2-201ENST00000433923 257 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 PTMAP6-201ENST00000439110 327 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDH1Q08174 RNU6-953P-201ENST00000459154 107 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 RPL37P6-201ENST00000460682 294 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 RPL9P32-201ENST00000464118 620 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 RPL31P60-201ENST00000478450 367 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDH1Q08174 RPS4XP20-201ENST00000505751 772 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 AL671862.1-201ENST00000515851 349 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 RNU6-1095P-201ENST00000516148 108 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 CDH12P4-201ENST00000517835 295 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 CDH12P3-201ENST00000517935 295 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 CDH12P1-201ENST00000518435 295 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 IGLV2-28-201ENST00000520681 304 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDH1Q08174 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDH1Q08174 AC069307.1-201ENST00000602820 447 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDH1Q08174 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDH1Q08174 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDH1Q08174 THAP12P5-201ENST00000405864 2275 ntBASIC5.04□□□□□ -1.6
PCDH1Q08174 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDH1Q08174 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDH1Q08174 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDH1Q08174 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDH1Q08174 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDH1Q08174 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDH1Q08174 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH1Q08174 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDH1Q08174 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 RNU6-288P-201ENST00000363690 104 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 RNU6-1303P-201ENST00000364841 107 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
PCDH1Q08174 Y_RNA.396-201ENST00000383949 103 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 RNU4-70P-201ENST00000384579 139 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 RNU6-817P-201ENST00000391083 104 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 AL356968.1-201ENST00000416622 474 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH1Q08174 AC090774.1-201ENST00000435925 246 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 OSTCP8-201ENST00000445117 448 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 TPT1P13-201ENST00000449760 499 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH1Q08174 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDH1Q08174 RPS23P3-201ENST00000470993 430 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 RN7SL177P-201ENST00000476596 299 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 RNA5SP228-201ENST00000516232 133 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 AC012400.1-201ENST00000518452 381 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 IGKV2-18-201ENST00000522607 343 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 ERHP1-201ENST00000523006 310 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 OR4H12P-201ENST00000556269 907 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDH1Q08174 AC109446.1-201ENST00000566172 220 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDH1Q08174 MIR4472-2-201ENST00000582069 67 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 MIR3936-201ENST00000584304 110 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC5.03□□□□□ -1.6
PCDH1Q08174 AC012669.1-201ENST00000603209 283 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 ELOCP5-201ENST00000604924 333 ntBASIC5.03□□□□□ -1.6
PCDH1Q08174 MIR6837-201ENST00000620884 64 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms