Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.01□□□□□ -2.25
HSPG2P98160 AL137100.2-201ENST00000555786 315 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 AL121821.2-201ENST00000556081 394 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.01□□□□□ -2.25
HSPG2P98160 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HSPG2P98160 AL121594.5-201ENST00000631724 573 ntBASIC1.01□□□□□ -2.25
HSPG2P98160 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1□□□□□ -2.25
HSPG2P98160 HMGB1P47-201ENST00000511281 589 ntBASIC1□□□□□ -2.25
HSPG2P98160 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1□□□□□ -2.25
HSPG2P98160 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1□□□□□ -2.25
HSPG2P98160 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1□□□□□ -2.25
HSPG2P98160 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1□□□□□ -2.25
HSPG2P98160 AC016727.2-201ENST00000603988 621 ntBASIC1□□□□□ -2.25
HSPG2P98160 NUP58P1-201ENST00000502546 1738 ntBASIC1□□□□□ -2.25
HSPG2P98160 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1□□□□□ -2.25
HSPG2P98160 AC002546.1-201ENST00000588041 2504 ntBASIC1□□□□□ -2.25
HSPG2P98160 AP001486.2-201ENST00000561652 5113 ntBASIC1□□□□□ -2.25
HSPG2P98160 RNA5SP138-201ENST00000365098 114 ntBASIC1□□□□□ -2.25
HSPG2P98160 AC090774.1-201ENST00000435925 246 ntBASIC1□□□□□ -2.25
HSPG2P98160 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1□□□□□ -2.25
HSPG2P98160 AL353093.1-201ENST00000441292 436 ntBASIC1□□□□□ -2.25
HSPG2P98160 RSL24D1P2-201ENST00000445584 366 ntBASIC1□□□□□ -2.25
HSPG2P98160 MIR1273G-201ENST00000577677 100 ntBASIC1□□□□□ -2.25
HSPG2P98160 AC012150.2-201ENST00000621300 544 ntBASIC1□□□□□ -2.25
HSPG2P98160 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1□□□□□ -2.25
HSPG2P98160 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
HSPG2P98160 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1□□□□□ -2.25
HSPG2P98160 AL513185.2-201ENST00000425543 193 ntBASIC1□□□□□ -2.25
HSPG2P98160 AL021397.1-201ENST00000451806 248 ntBASIC1□□□□□ -2.25
HSPG2P98160 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1□□□□□ -2.25
HSPG2P98160 AC034222.1-201ENST00000494052 532 ntBASIC1□□□□□ -2.25
HSPG2P98160 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1□□□□□ -2.25
HSPG2P98160 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1□□□□□ -2.25
HSPG2P98160 VN1R74P-201ENST00000613259 503 ntBASIC1□□□□□ -2.25
HSPG2P98160 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HSPG2P98160 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HSPG2P98160 MIR1323-201ENST00000408090 73 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 RNU6-516P-201ENST00000411381 104 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 MTND1P23-201ENST00000416931 372 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC0.99□□□□□ -2.25
HSPG2P98160 HAR1A.1-201ENST00000459583 118 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
HSPG2P98160 AC114801.2-201ENST00000503825 781 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 AC108078.1-201ENST00000508073 725 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 MTATP6P3-201ENST00000581686 676 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 U6.98-201ENST00000637157 84 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
HSPG2P98160 RNU4-13P-201ENST00000364019 141 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 RNA5SP167-201ENST00000365461 116 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 Z98749.2-208ENST00000381646 500 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 MIR591-201ENST00000385290 95 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 BTBD10P2-201ENST00000404779 676 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.99□□□□□ -2.25
HSPG2P98160 FTH1P12-201ENST00000432137 551 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 RPL21P2-201ENST00000440049 481 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 AF131216.2-201ENST00000512316 564 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC0.99□□□□□ -2.25
HSPG2P98160 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC0.99□□□□□ -2.25
HSPG2P98160 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.99□□□□□ -2.25
HSPG2P98160 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
HSPG2P98160 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.99□□□□□ -2.25
HSPG2P98160 AC005517.2-201ENST00000424673 553 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 CALM1P1-201ENST00000442082 433 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC0.99□□□□□ -2.25
HSPG2P98160 RNU6-1223P-201ENST00000517124 104 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 RNA5SP402-201ENST00000517148 110 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.99□□□□□ -2.25
HSPG2P98160 AC109446.2-201ENST00000567872 497 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC0.99□□□□□ -2.25
HSPG2P98160 AC006026.1-201ENST00000444025 1803 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 MTCO3P30-201ENST00000426425 670 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC0.99□□□□□ -2.25
HSPG2P98160 HMGB1P12-201ENST00000438594 598 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 AC011979.1-201ENST00000472300 483 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 C1GALT1P2-201ENST00000510813 1104 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC0.99□□□□□ -2.25
HSPG2P98160 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.99□□□□□ -2.25
HSPG2P98160 AC104581.2-201ENST00000572227 430 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 ABI1P1-201ENST00000603375 1120 ntBASIC0.99□□□□□ -2.25
HSPG2P98160 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC0.98□□□□□ -2.25
HSPG2P98160 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
HSPG2P98160 RNU4-51P-201ENST00000364206 140 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC0.98□□□□□ -2.25
HSPG2P98160 AL049838.1-201ENST00000563647 981 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 MAGOH2P-202ENST00000584384 429 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 7SK.7-201ENST00000603504 247 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 AC073348.1-201ENST00000623002 331 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 MTCO1P14-201ENST00000441695 1559 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 RBBP8P1-201ENST00000449447 1844 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 DEFB109C-201ENST00000382575 264 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 DEFB109B-201ENST00000382656 264 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 RNU6-882P-201ENST00000391025 103 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 RPL23AP29-201ENST00000397284 453 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 RNU2-37P-201ENST00000410695 177 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 AC093084.1-201ENST00000424233 687 ntBASIC0.98□□□□□ -2.25
HSPG2P98160 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC0.98□□□□□ -2.25
HSPG2P98160 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC0.98□□□□□ -2.25
HSPG2P98160 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.98□□□□□ -2.25
HSPG2P98160 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.98□□□□□ -2.25
HSPG2P98160 AC023813.2-201ENST00000564321 469 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms