Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.22□□□□□ -2.05
ACTBP60709 AC022336.2-201ENST00000568966 2538 ntBASIC2.22□□□□□ -2.05
ACTBP60709 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.22□□□□□ -2.05
ACTBP60709 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
ACTBP60709 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.21□□□□□ -2.05
ACTBP60709 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.21□□□□□ -2.05
ACTBP60709 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.21□□□□□ -2.06
ACTBP60709 FRG1BP-201ENST00000278882 761 ntBASIC2.21□□□□□ -2.06
ACTBP60709 RNU6-251P-201ENST00000363235 104 ntBASIC2.21□□□□□ -2.06
ACTBP60709 SNORD65C-201ENST00000390962 71 ntBASIC2.21□□□□□ -2.06
ACTBP60709 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ACTBP60709 AL162578.1-201ENST00000406202 378 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.21□□□□□ -2.06
ACTBP60709 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.21□□□□□ -2.06
ACTBP60709 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.21□□□□□ -2.06
ACTBP60709 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.21□□□□□ -2.06
ACTBP60709 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.21□□□□□ -2.06
ACTBP60709 UBE2V1P13-201ENST00000436983 439 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AL691517.1-201ENST00000440833 1235 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AC011816.1-201ENST00000441346 546 ntBASIC2.21□□□□□ -2.06
ACTBP60709 FGF7P5-201ENST00000441829 291 ntBASIC2.21□□□□□ -2.06
ACTBP60709 RPS24P13-201ENST00000442520 397 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AL135938.1-201ENST00000443141 297 ntBASIC2.21□□□□□ -2.06
ACTBP60709 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.21□□□□□ -2.06
ACTBP60709 GTF2IP12-201ENST00000456547 356 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.21□□□□□ -2.06
ACTBP60709 AC023424.2-201ENST00000493479 777 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AC011352.3-201ENST00000505162 593 ntBASIC2.21□□□□□ -2.06
ACTBP60709 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.21□□□□□ -2.06
ACTBP60709 RNU6-27P-201ENST00000516146 107 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.21□□□□□ -2.06
ACTBP60709 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.21□□□□□ -2.06
ACTBP60709 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.21□□□□□ -2.06
ACTBP60709 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.21□□□□□ -2.06
ACTBP60709 AC007954.1-201ENST00000554198 494 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.21□□□□□ -2.06
ACTBP60709 AC023824.2-201ENST00000566185 400 ntBASIC2.21□□□□□ -2.06
ACTBP60709 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AC011471.1-201ENST00000585766 187 ntBASIC2.21□□□□□ -2.06
ACTBP60709 MIR6840-201ENST00000611937 71 ntBASIC2.21□□□□□ -2.06
ACTBP60709 VN1R9P-201ENST00000614184 867 ntBASIC2.21□□□□□ -2.06
ACTBP60709 SCARNA15.3-201ENST00000626315 122 ntBASIC2.21□□□□□ -2.06
ACTBP60709 SCARNA4.1-201ENST00000628597 123 ntBASIC2.21□□□□□ -2.06
ACTBP60709 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.21□□□□□ -2.06
ACTBP60709 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
ACTBP60709 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ACTBP60709 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ACTBP60709 RNU6-115P-201ENST00000364310 107 ntBASIC2.2□□□□□ -2.06
ACTBP60709 NPM1P10-201ENST00000398310 865 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AL138827.1-201ENST00000402666 306 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AL024474.1-201ENST00000404655 591 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AL355615.1-201ENST00000406187 641 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AL139098.1-201ENST00000407291 389 ntBASIC2.2□□□□□ -2.06
ACTBP60709 RNA5SP21-201ENST00000410917 96 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AL158050.1-201ENST00000416077 457 ntBASIC2.2□□□□□ -2.06
ACTBP60709 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
ACTBP60709 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.2□□□□□ -2.06
ACTBP60709 AL590383.1-201ENST00000428602 75 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AC012497.1-201ENST00000429392 575 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.2□□□□□ -2.06
ACTBP60709 AC002542.1-201ENST00000440683 193 ntBASIC2.2□□□□□ -2.06
ACTBP60709 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.2□□□□□ -2.06
ACTBP60709 AL592447.1-201ENST00000447592 540 ntBASIC2.2□□□□□ -2.06
ACTBP60709 CDC42P1-201ENST00000456658 548 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AC090096.1-201ENST00000489168 390 ntBASIC2.2□□□□□ -2.06
ACTBP60709 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ACTBP60709 AC093767.1-201ENST00000504523 156 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.2□□□□□ -2.06
ACTBP60709 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.2□□□□□ -2.06
ACTBP60709 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.2□□□□□ -2.06
ACTBP60709 AC087241.2-201ENST00000535801 324 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.2□□□□□ -2.06
ACTBP60709 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.2□□□□□ -2.06
ACTBP60709 CYCSP39-201ENST00000565821 309 ntBASIC2.2□□□□□ -2.06
ACTBP60709 LARP7P3-201ENST00000579888 337 ntBASIC2.2□□□□□ -2.06
ACTBP60709 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.2□□□□□ -2.06
ACTBP60709 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.2□□□□□ -2.06
ACTBP60709 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.2□□□□□ -2.06
ACTBP60709 AC245100.7-201ENST00000609678 442 ntBASIC2.2□□□□□ -2.06
ACTBP60709 HMGB1P24-202ENST00000615653 685 ntBASIC2.2□□□□□ -2.06
ACTBP60709 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ACTBP60709 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ACTBP60709 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.2□□□□□ -2.06
ACTBP60709 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
ACTBP60709 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
ACTBP60709 HMGB1P5-201ENST00000255320 642 ntBASIC2.19□□□□□ -2.06
ACTBP60709 RNU6-1155P-201ENST00000363554 107 ntBASIC2.19□□□□□ -2.06
ACTBP60709 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.19□□□□□ -2.06
ACTBP60709 SNORA51.6-201ENST00000384151 125 ntBASIC2.19□□□□□ -2.06
ACTBP60709 SNORD51-201ENST00000384320 80 ntBASIC2.19□□□□□ -2.06
ACTBP60709 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ACTBP60709 RNU4-72P-201ENST00000410754 173 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AL592148.1-201ENST00000413568 445 ntBASIC2.19□□□□□ -2.06
ACTBP60709 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.19□□□□□ -2.06
ACTBP60709 AC005345.1-201ENST00000431868 217 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.19□□□□□ -2.06
ACTBP60709 EIF4EP3-201ENST00000498782 656 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AC098799.1-201ENST00000504752 800 ntBASIC2.19□□□□□ -2.06
ACTBP60709 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.19□□□□□ -2.06
ACTBP60709 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms