Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC114967.1-201ENST00000504890 259 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 RNU6-798P-201ENST00000516912 103 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 RNU2-46P-201ENST00000517038 113 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC109635.4-202ENST00000531666 412 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AP000857.1-201ENST00000532151 543 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC006270.2-201ENST00000578523 652 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 MTND1P15-201ENST00000579262 949 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 KC877982.1-201ENST00000602313 470 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC007038.2-201ENST00000608095 740 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AC072046.2-201ENST00000618366 268 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 MIR4275-201ENST00000636486 87 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 AP000553.6-201ENST00000641242 118 ntBASIC3.63□□□□□ -1.83
CLDN2P57739 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CLDN2P57739 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN2P57739 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN2P57739 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN2P57739 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLDN2P57739 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.63□□□□□ -1.83
CLDN2P57739 AC092447.7-201ENST00000422212 1621 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
CLDN2P57739 AP001350.1-201ENST00000601906 1524 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 U8.3-201ENST00000363321 132 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 RNA5SP189-201ENST00000364920 115 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 RNU6-432P-201ENST00000384196 109 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 Y_RNA.517-201ENST00000384551 106 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 MIR490-201ENST00000384865 128 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 MIR34B-201ENST00000385076 84 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 RNU6-882P-201ENST00000391025 103 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 RNA5SP239-201ENST00000410218 129 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 RNU4-65P-201ENST00000410473 140 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 C1DP2-201ENST00000418167 426 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AL589872.1-201ENST00000426602 288 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC010975.2-201ENST00000427781 588 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AL159987.2-201ENST00000432754 307 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN2P57739 NPM1P49-201ENST00000448027 714 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 MTCYBP1-201ENST00000454315 1119 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN2P57739 MTND1P12-201ENST00000455231 147 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.62□□□□□ -1.83
CLDN2P57739 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN2P57739 AC074250.1-201ENST00000511117 192 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN2P57739 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN2P57739 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.62□□□□□ -1.83
CLDN2P57739 SUMO2P20-201ENST00000520803 283 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AP003181.2-201ENST00000528941 181 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AL133271.1-201ENST00000538229 291 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC007458.1-201ENST00000542812 373 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC107016.1-201ENST00000550463 337 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN2P57739 MIR3118-1-201ENST00000581787 76 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 ZNF415P1-201ENST00000582279 1166 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC073648.5-201ENST00000603502 305 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AL161756.2-201ENST00000604597 246 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.62□□□□□ -1.83
CLDN2P57739 AL590282.1-201ENST00000610379 1136 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC008498.1-201ENST00000613012 531 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC093838.1-201ENST00000613014 469 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC091834.1-201ENST00000614543 472 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 AC091953.2-201ENST00000623979 160 ntBASIC3.62□□□□□ -1.83
CLDN2P57739 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN2P57739 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN2P57739 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLDN2P57739 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.62□□□□□ -1.83
CLDN2P57739 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN2P57739 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN2P57739 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN2P57739 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN2P57739 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN2P57739 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
CLDN2P57739 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN2P57739 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN2P57739 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
CLDN2P57739 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN2P57739 RNY4P34-201ENST00000364779 95 ntBASIC3.61□□□□□ -1.83
CLDN2P57739 RNU5A-6P-201ENST00000384136 116 ntBASIC3.61□□□□□ -1.83
CLDN2P57739 Y_RNA.505-201ENST00000384489 102 ntBASIC3.61□□□□□ -1.83
CLDN2P57739 RNVU1-14-201ENST00000384770 164 ntBASIC3.61□□□□□ -1.83
CLDN2P57739 RNU6-278P-201ENST00000390945 109 ntBASIC3.61□□□□□ -1.83
CLDN2P57739 Y_RNA.582-201ENST00000391023 95 ntBASIC3.61□□□□□ -1.83
CLDN2P57739 RPL23AP32-201ENST00000395315 459 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms