Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPL9P32-201ENST00000464118 620 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AC108860.1-201ENST00000484521 383 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 NIPA2P2-201ENST00000496376 1083 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.24□□□□□ -1.73
TM4SF4P48230 Y_RNA.672-201ENST00000516289 104 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 DEFB108D-201ENST00000527787 222 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.24□□□□□ -1.73
TM4SF4P48230 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.24□□□□□ -1.73
TM4SF4P48230 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.24□□□□□ -1.73
TM4SF4P48230 CKS1BP3-201ENST00000600888 237 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AC004067.1-201ENST00000608733 700 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AL355472.4-201ENST00000610233 626 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AL355810.1-201ENST00000614629 552 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AC095031.1-201ENST00000623685 672 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 AL603839.4-201ENST00000624658 1005 ntBASIC4.24□□□□□ -1.73
TM4SF4P48230 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TM4SF4P48230 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
TM4SF4P48230 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TM4SF4P48230 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TM4SF4P48230 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TM4SF4P48230 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC139713.2-215ENST00000641428 5037 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TM4SF4P48230 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TM4SF4P48230 RNU4-35P-201ENST00000362588 141 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 RNY4P34-201ENST00000364779 95 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.23□□□□□ -1.73
TM4SF4P48230 RNA5SP424-201ENST00000390988 115 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.23□□□□□ -1.73
TM4SF4P48230 RN7SL585P-201ENST00000470538 280 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 RPS27AP1-201ENST00000475545 471 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 RAP1BP2-201ENST00000478270 544 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC025518.1-201ENST00000479856 347 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC135721.1-201ENST00000497954 479 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 RN7SKP244-201ENST00000516513 307 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 RNA5SP468-201ENST00000516782 93 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 IGKV2-38-201ENST00000517443 247 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 DEFB108A-201ENST00000530110 222 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 AC100770.1-201ENST00000532310 322 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AL133153.1-201ENST00000557756 303 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 AC099489.2-201ENST00000574976 260 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AP001029.3-201ENST00000588063 596 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 AC012150.2-201ENST00000621300 544 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC110994.2-201ENST00000635481 492 ntBASIC4.23□□□□□ -1.73
TM4SF4P48230 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TM4SF4P48230 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.23□□□□□ -1.73
TM4SF4P48230 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TM4SF4P48230 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM4SF4P48230 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM4SF4P48230 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.22□□□□□ -1.73
TM4SF4P48230 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.22□□□□□ -1.73
TM4SF4P48230 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TM4SF4P48230 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TM4SF4P48230 RNU5A-1-201ENST00000362698 116 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 Y_RNA.194-201ENST00000363985 102 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 CDK8P2-201ENST00000415020 547 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC137499.1-201ENST00000427602 88 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC093156.1-201ENST00000440382 670 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 RABEPKP1-201ENST00000440529 1026 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 USP9YP15-201ENST00000442391 422 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AL162389.1-201ENST00000449233 177 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 AC008481.1-201ENST00000463278 396 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 RPS4XP13-201ENST00000483219 789 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 AC011825.1-201ENST00000484967 388 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.22□□□□□ -1.73
TM4SF4P48230 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TM4SF4P48230 RN7SKP298-201ENST00000515950 94 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 SNORA70.18-201ENST00000516696 98 ntBASIC4.22□□□□□ -1.73
TM4SF4P48230 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.22□□□□□ -1.73
TM4SF4P48230 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.22□□□□□ -1.73
TM4SF4P48230 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms