Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.56□□□□□ -2
SCN4AP35499 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
SCN4AP35499 VN1R80P-201ENST00000597126 338 ntBASIC2.56□□□□□ -2
SCN4AP35499 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
SCN4AP35499 AC005156.1-201ENST00000613371 573 ntBASIC2.56□□□□□ -2
SCN4AP35499 VN1R7P-201ENST00000619242 903 ntBASIC2.56□□□□□ -2
SCN4AP35499 MIR6132-201ENST00000622083 109 ntBASIC2.56□□□□□ -2
SCN4AP35499 OR1S1-201ENST00000624470 978 ntBASIC2.56□□□□□ -2
SCN4AP35499 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC2.56□□□□□ -2
SCN4AP35499 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCN4AP35499 MTND5P31-201ENST00000419366 1374 ntBASIC2.55□□□□□ -2
SCN4AP35499 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.55□□□□□ -2
SCN4AP35499 Y_RNA.116-201ENST00000363292 103 ntBASIC2.55□□□□□ -2
SCN4AP35499 EI24P1-201ENST00000416584 867 ntBASIC2.55□□□□□ -2
SCN4AP35499 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.55□□□□□ -2
SCN4AP35499 RPL30P3-201ENST00000424262 333 ntBASIC2.55□□□□□ -2
SCN4AP35499 AC093422.3-201ENST00000428506 305 ntBASIC2.55□□□□□ -2
SCN4AP35499 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.55□□□□□ -2
SCN4AP35499 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.55□□□□□ -2
SCN4AP35499 RPS26P30-201ENST00000443431 335 ntBASIC2.55□□□□□ -2
SCN4AP35499 HSFY3P-201ENST00000444242 1191 ntBASIC2.55□□□□□ -2
SCN4AP35499 AL096803.2-201ENST00000450032 677 ntBASIC2.55□□□□□ -2
SCN4AP35499 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.55□□□□□ -2
SCN4AP35499 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.55□□□□□ -2
SCN4AP35499 MTCO2P9-201ENST00000503214 694 ntBASIC2.55□□□□□ -2
SCN4AP35499 RN7SKP82-201ENST00000516786 223 ntBASIC2.55□□□□□ -2
SCN4AP35499 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.55□□□□□ -2
SCN4AP35499 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.55□□□□□ -2
SCN4AP35499 AC004217.3-201ENST00000551552 878 ntBASIC2.55□□□□□ -2
SCN4AP35499 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.55□□□□□ -2
SCN4AP35499 AC005014.3-201ENST00000605985 190 ntBASIC2.55□□□□□ -2
SCN4AP35499 AC108479.2-201ENST00000617314 601 ntBASIC2.55□□□□□ -2
SCN4AP35499 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.55□□□□□ -2
SCN4AP35499 AC073055.1-201ENST00000456901 1621 ntBASIC2.54□□□□□ -2
SCN4AP35499 RNU6-354P-201ENST00000383862 107 ntBASIC2.54□□□□□ -2
SCN4AP35499 RNU6-610P-201ENST00000384264 107 ntBASIC2.54□□□□□ -2
SCN4AP35499 MTND4P13-201ENST00000402078 1023 ntBASIC2.54□□□□□ -2
SCN4AP35499 AL158053.1-201ENST00000441503 453 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC112518.2-201ENST00000508565 425 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.54□□□□□ -2
SCN4AP35499 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.54□□□□□ -2
SCN4AP35499 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.54□□□□□ -2
SCN4AP35499 AP003717.3-201ENST00000544832 1180 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC023825.1-201ENST00000566704 1030 ntBASIC2.54□□□□□ -2
SCN4AP35499 BPTFP1-201ENST00000579209 492 ntBASIC2.54□□□□□ -2
SCN4AP35499 VN1R88P-201ENST00000596787 292 ntBASIC2.54□□□□□ -2
SCN4AP35499 AL356575.1-201ENST00000603008 283 ntBASIC2.54□□□□□ -2
SCN4AP35499 AL160237.3-201ENST00000604114 1013 ntBASIC2.54□□□□□ -2
SCN4AP35499 FRG1HP-204ENST00000617940 757 ntBASIC2.54□□□□□ -2
SCN4AP35499 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SCN4AP35499 AL161431.1-201ENST00000618966 4205 ntBASIC2.54□□□□□ -2
SCN4AP35499 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.54□□□□□ -2
SCN4AP35499 AC011978.2-201ENST00000569835 2054 ntBASIC2.54□□□□□ -2
SCN4AP35499 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.54□□□□□ -2
SCN4AP35499 AC004520.1-201ENST00000608362 1413 ntBASIC2.54□□□□□ -2
SCN4AP35499 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.54□□□□□ -2
SCN4AP35499 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.54□□□□□ -2
SCN4AP35499 MIR337-201ENST00000362281 93 ntBASIC2.54□□□□□ -2
SCN4AP35499 RNU6-543P-201ENST00000362576 108 ntBASIC2.54□□□□□ -2
SCN4AP35499 MIR489-201ENST00000384923 84 ntBASIC2.54□□□□□ -2
SCN4AP35499 AL133384.1-201ENST00000412744 351 ntBASIC2.54□□□□□ -2
SCN4AP35499 RPL31P2-201ENST00000413849 377 ntBASIC2.54□□□□□ -2
SCN4AP35499 MTND2P16-201ENST00000419987 799 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC129850.1-201ENST00000436203 508 ntBASIC2.54□□□□□ -2
SCN4AP35499 NAMPTP2-201ENST00000505629 1115 ntBASIC2.54□□□□□ -2
SCN4AP35499 RNU6-334P-201ENST00000517072 102 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC126177.3-201ENST00000551839 688 ntBASIC2.54□□□□□ -2
SCN4AP35499 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.54□□□□□ -2
SCN4AP35499 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.54□□□□□ -2
SCN4AP35499 SUB1P3-201ENST00000564581 315 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.54□□□□□ -2
SCN4AP35499 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
SCN4AP35499 BNIP3P4-201ENST00000604946 565 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC121761.2-201ENST00000617300 689 ntBASIC2.54□□□□□ -2
SCN4AP35499 AC244517.12-201ENST00000623581 663 ntBASIC2.54□□□□□ -2
SCN4AP35499 AL121594.5-201ENST00000631724 573 ntBASIC2.54□□□□□ -2
SCN4AP35499 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.54□□□□□ -2
SCN4AP35499 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCN4AP35499 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCN4AP35499 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
SCN4AP35499 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SCN4AP35499 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
SCN4AP35499 RNU6-457P-201ENST00000363999 107 ntBASIC2.53□□□□□ -2
SCN4AP35499 MIR153-1-201ENST00000384914 90 ntBASIC2.53□□□□□ -2
SCN4AP35499 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.53□□□□□ -2
SCN4AP35499 RNU2-21P-201ENST00000410368 188 ntBASIC2.53□□□□□ -2
SCN4AP35499 RNA5SP270-201ENST00000411361 118 ntBASIC2.53□□□□□ -2
SCN4AP35499 HMGB1P11-201ENST00000413899 637 ntBASIC2.53□□□□□ -2
SCN4AP35499 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.53□□□□□ -2
SCN4AP35499 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.53□□□□□ -2
SCN4AP35499 NDUFA5P4-201ENST00000436704 385 ntBASIC2.53□□□□□ -2
SCN4AP35499 NDUFB4P6-201ENST00000436819 366 ntBASIC2.53□□□□□ -2
SCN4AP35499 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.53□□□□□ -2
SCN4AP35499 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.53□□□□□ -2
SCN4AP35499 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.53□□□□□ -2
SCN4AP35499 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.53□□□□□ -2
SCN4AP35499 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.53□□□□□ -2
SCN4AP35499 OR5H4P-201ENST00000510851 923 ntBASIC2.53□□□□□ -2
SCN4AP35499 TBCAP3-201ENST00000512475 312 ntBASIC2.53□□□□□ -2
SCN4AP35499 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms