Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 NARSP2-201ENST00000518524 679 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC022861.1-201ENST00000522981 663 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.02□□□□□ -1.77
CIITAP33076 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.02□□□□□ -1.77
CIITAP33076 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.02□□□□□ -1.77
CIITAP33076 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.02□□□□□ -1.77
CIITAP33076 BNIP3P8-201ENST00000597863 560 ntBASIC4.02□□□□□ -1.77
CIITAP33076 SNRPGP15-201ENST00000600149 222 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC080013.4-201ENST00000607624 649 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC007684.1-201ENST00000609671 477 ntBASIC4.02□□□□□ -1.77
CIITAP33076 MIR7851-201ENST00000610611 160 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AC091834.1-201ENST00000614543 472 ntBASIC4.02□□□□□ -1.77
CIITAP33076 CR381572.1-201ENST00000625098 102 ntBASIC4.02□□□□□ -1.77
CIITAP33076 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.02□□□□□ -1.77
CIITAP33076 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.02□□□□□ -1.77
CIITAP33076 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CIITAP33076 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CIITAP33076 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CIITAP33076 USP8P1-201ENST00000494673 3183 ntBASIC4.01□□□□□ -1.77
CIITAP33076 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CIITAP33076 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CIITAP33076 RN7SKP226-201ENST00000364912 300 ntBASIC4.01□□□□□ -1.77
CIITAP33076 RNU6-1181P-201ENST00000384191 106 ntBASIC4.01□□□□□ -1.77
CIITAP33076 RNU6-821P-201ENST00000390995 107 ntBASIC4.01□□□□□ -1.77
CIITAP33076 MTND4LP20-201ENST00000402379 270 ntBASIC4.01□□□□□ -1.77
CIITAP33076 RPS3AP3-201ENST00000411933 242 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.01□□□□□ -1.77
CIITAP33076 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.01□□□□□ -1.77
CIITAP33076 RPS29P4-201ENST00000414733 161 ntBASIC4.01□□□□□ -1.77
CIITAP33076 HMGB3P23-201ENST00000414981 585 ntBASIC4.01□□□□□ -1.77
CIITAP33076 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.01□□□□□ -1.77
CIITAP33076 OR2B8P-201ENST00000432841 938 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC091862.1-201ENST00000438016 1100 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.01□□□□□ -1.77
CIITAP33076 SNRPFP4-201ENST00000456366 242 ntBASIC4.01□□□□□ -1.77
CIITAP33076 RPL9P32-201ENST00000464118 620 ntBASIC4.01□□□□□ -1.77
CIITAP33076 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CIITAP33076 RPL7L1P8-201ENST00000469911 741 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.01□□□□□ -1.77
CIITAP33076 TMED11P-201ENST00000479478 690 ntBASIC4.01□□□□□ -1.77
CIITAP33076 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.01□□□□□ -1.77
CIITAP33076 AC091133.4-201ENST00000511142 308 ntBASIC4.01□□□□□ -1.77
CIITAP33076 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.01□□□□□ -1.77
CIITAP33076 RNU2-58P-201ENST00000516403 183 ntBASIC4.01□□□□□ -1.77
CIITAP33076 RNU6-1003P-201ENST00000517099 105 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC134698.4-201ENST00000523451 826 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.01□□□□□ -1.77
CIITAP33076 MTND4LP18-201ENST00000526864 291 ntBASIC4.01□□□□□ -1.77
CIITAP33076 ZNF519P3-201ENST00000557158 1032 ntBASIC4.01□□□□□ -1.77
CIITAP33076 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.01□□□□□ -1.77
CIITAP33076 TPRKBP2-201ENST00000565969 475 ntBASIC4.01□□□□□ -1.77
CIITAP33076 MIR5186-201ENST00000577504 120 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC008739.3-201ENST00000603262 127 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC090578.1-201ENST00000604955 591 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AL390208.1-201ENST00000605885 644 ntBASIC4.01□□□□□ -1.77
CIITAP33076 HMGN2P28-201ENST00000606102 262 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC126118.1-201ENST00000607744 628 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC004009.2-201ENST00000623016 728 ntBASIC4.01□□□□□ -1.77
CIITAP33076 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.01□□□□□ -1.77
CIITAP33076 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.01□□□□□ -1.77
CIITAP33076 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CIITAP33076 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CIITAP33076 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.01□□□□□ -1.77
CIITAP33076 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.01□□□□□ -1.77
CIITAP33076 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.01□□□□□ -1.77
CIITAP33076 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4□□□□□ -1.77
CIITAP33076 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CIITAP33076 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4□□□□□ -1.77
CIITAP33076 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4□□□□□ -1.77
CIITAP33076 THUMPD3P1-201ENST00000506556 1480 ntBASIC4□□□□□ -1.77
CIITAP33076 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CIITAP33076 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4□□□□□ -1.77
CIITAP33076 RNY4P24-201ENST00000362735 96 ntBASIC4□□□□□ -1.77
CIITAP33076 RNU6-1042P-201ENST00000384204 107 ntBASIC4□□□□□ -1.77
CIITAP33076 MIR218-2-201ENST00000385006 110 ntBASIC4□□□□□ -1.77
CIITAP33076 SNORD115.1-201ENST00000391109 76 ntBASIC4□□□□□ -1.77
CIITAP33076 RN7SKP111-201ENST00000410349 271 ntBASIC4□□□□□ -1.77
CIITAP33076 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 CRYBB2P1-203ENST00000415709 538 ntBASIC4□□□□□ -1.77
CIITAP33076 AC069157.1-201ENST00000421749 137 ntBASIC4□□□□□ -1.77
CIITAP33076 AC007742.1-201ENST00000425789 329 ntBASIC4□□□□□ -1.77
CIITAP33076 AL035410.1-201ENST00000427409 427 ntBASIC4□□□□□ -1.77
CIITAP33076 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 MTCYBP45-201ENST00000435243 565 ntBASIC4□□□□□ -1.77
CIITAP33076 ELOCP26-201ENST00000436067 329 ntBASIC4□□□□□ -1.77
CIITAP33076 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4□□□□□ -1.77
CIITAP33076 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4□□□□□ -1.77
CIITAP33076 MTND6P13-201ENST00000443510 523 ntBASIC4□□□□□ -1.77
CIITAP33076 PAXBP1P1-201ENST00000449315 447 ntBASIC4□□□□□ -1.77
CIITAP33076 Z82190.1-201ENST00000454534 490 ntBASIC4□□□□□ -1.77
CIITAP33076 AC007967.1-201ENST00000455422 1159 ntBASIC4□□□□□ -1.77
CIITAP33076 RPL21P104-201ENST00000464143 478 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms