Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MTND1P8-201ENST00000571424 950 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AL391001.1-201ENST00000602747 715 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.17□□□□□ -2.06
COL8A2P25067 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.17□□□□□ -2.06
COL8A2P25067 RPP40P2-201ENST00000603596 712 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AL160237.3-201ENST00000604114 1013 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AL445435.1-201ENST00000604232 665 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 DPRXP5-201ENST00000604662 539 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 RPL23AP88-201ENST00000605759 454 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AL157392.4-201ENST00000609756 345 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AC009237.15-201ENST00000610252 501 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AL390240.1-201ENST00000612950 384 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AC010975.3-201ENST00000618727 978 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.17□□□□□ -2.06
COL8A2P25067 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.17□□□□□ -2.06
COL8A2P25067 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.17□□□□□ -2.06
COL8A2P25067 CR381653.2-201ENST00000624041 768 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AC098679.5-201ENST00000624394 571 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.17□□□□□ -2.06
COL8A2P25067 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.17□□□□□ -2.06
COL8A2P25067 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.17□□□□□ -2.06
COL8A2P25067 AP002907.1-201ENST00000606361 1430 ntBASIC2.17□□□□□ -2.06
COL8A2P25067 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL8A2P25067 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL8A2P25067 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
COL8A2P25067 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.16□□□□□ -2.06
COL8A2P25067 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 NACA3P-201ENST00000359690 648 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 VTRNA1-1-201ENST00000363120 99 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 RNU6-839P-201ENST00000363347 108 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL8A2P25067 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 SNORD116-12-201ENST00000384468 92 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 MIR649-201ENST00000384843 97 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AL445529.1-201ENST00000398713 389 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AL139095.1-201ENST00000404326 391 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AL139098.1-201ENST00000407291 389 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AL591034.1-201ENST00000407447 340 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 Z75741.2-201ENST00000417272 1167 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 FNDC3CP-201ENST00000420795 1155 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 MTCO1P3-201ENST00000429327 192 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 MYL8P-204ENST00000431574 518 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.16□□□□□ -2.06
COL8A2P25067 AL606517.1-201ENST00000446914 387 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 EEF1B2P7-201ENST00000451177 676 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 RPS23P3-201ENST00000470993 430 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC010301.1-201ENST00000473936 355 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 RPS27AP9-201ENST00000477681 438 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 SRIP1-201ENST00000489235 288 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 OR5H5P-201ENST00000503164 928 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC011352.3-201ENST00000505162 593 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.16□□□□□ -2.06
COL8A2P25067 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 RNU1-61P-201ENST00000516107 151 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 RNA5SP135-201ENST00000517019 125 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 AP001317.1-201ENST00000531194 960 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 OR8K4P-201ENST00000534608 872 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC243972.3-201ENST00000539655 198 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC128657.1-201ENST00000549459 145 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.16□□□□□ -2.06
COL8A2P25067 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 AC074051.3-201ENST00000570238 358 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.16□□□□□ -2.06
COL8A2P25067 MTCO2P2-201ENST00000591258 225 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC091057.2-201ENST00000602594 792 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AP003973.1-201ENST00000604639 691 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC128687.1-201ENST00000605304 619 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AL050303.3-201ENST00000613704 284 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC068722.2-201ENST00000618734 544 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.16□□□□□ -2.06
COL8A2P25067 AC091046.2-201ENST00000620775 665 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 AC023510.2-201ENST00000622162 746 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.16□□□□□ -2.06
COL8A2P25067 MFSD8-245ENST00000641743 948 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
COL8A2P25067 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL8A2P25067 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.16□□□□□ -2.06
COL8A2P25067 DBF4P1-201ENST00000412976 1892 ntBASIC2.16□□□□□ -2.06
COL8A2P25067 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL8A2P25067 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL8A2P25067 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.15□□□□□ -2.06
COL8A2P25067 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
COL8A2P25067 MTND5P31-201ENST00000419366 1374 ntBASIC2.15□□□□□ -2.07
COL8A2P25067 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL8A2P25067 RNU6-707P-201ENST00000364647 95 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms