Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 VN1R88P-201ENST00000596787 292 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 SRGNP1-201ENST00000603392 451 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AL022099.1-201ENST00000604551 712 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CXCL1P09341 CR589904.2-201ENST00000612533 440 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 FRG1HP-204ENST00000617940 757 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AL731566.2-201ENST00000618971 317 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 MIR6766-201ENST00000622641 72 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC098679.5-201ENST00000624394 571 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.71□□□□□ -2.14
CXCL1P09341 AP003399.1-201ENST00000637534 361 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.71□□□□□ -2.14
CXCL1P09341 ZNF658B-202ENST00000615961 3375 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 AC025263.3-201ENST00000622965 1396 ntBASIC1.71□□□□□ -2.14
CXCL1P09341 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CXCL1P09341 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 RNU6-1155P-201ENST00000363554 107 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 SNORA48.3-201ENST00000391081 134 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AL355497.1-201ENST00000406262 551 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 RNU2-40P-201ENST00000410833 196 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 RN7SKP140-201ENST00000411196 284 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 RPL17P12-201ENST00000413391 526 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL1P09341 SEPT2P1-201ENST00000419651 180 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC012497.1-201ENST00000429392 575 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC107083.1-201ENST00000439643 279 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL1P09341 FGF7P5-201ENST00000441829 291 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AL591719.1-201ENST00000444669 744 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.7□□□□□ -2.14
CXCL1P09341 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 ATP5F1P5-201ENST00000526403 760 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 OR4P1P-201ENST00000530808 1136 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.7□□□□□ -2.14
CXCL1P09341 OR11H5P-201ENST00000554039 926 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL1P09341 MIR5195-201ENST00000583555 115 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC005498.1-201ENST00000592125 465 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC006023.1-201ENST00000603944 259 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 ATP1B3P1-201ENST00000605365 821 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 AC135507.1-201ENST00000607214 561 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC107294.1-201ENST00000609524 467 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC245100.7-201ENST00000609678 442 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CXCL1P09341 AC009090.3-201ENST00000616553 565 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC009159.1-201ENST00000618386 642 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC009318.4-201ENST00000620496 486 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL1P09341 OR8B1P-202ENST00000641132 1178 ntBASIC1.7□□□□□ -2.14
CXCL1P09341 AL359851.1-201ENST00000569460 4997 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 AL354685.2-201ENST00000448218 1447 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 DEFB108F-201ENST00000344638 222 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 MIR34A-201ENST00000385130 110 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 SUMO2P12-201ENST00000405924 140 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 MIR1290-201ENST00000408735 78 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 AC063976.3-201ENST00000426849 329 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.69□□□□□ -2.14
CXCL1P09341 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.69□□□□□ -2.14
CXCL1P09341 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC104164.3-201ENST00000467363 1258 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL1P09341 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC026436.1-201ENST00000510537 270 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 MRPS36P2-201ENST00000512569 299 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 COX6CP8-201ENST00000522620 226 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 DEFB108D-201ENST00000527787 222 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 OR4K7P-201ENST00000580232 945 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.69□□□□□ -2.14
CXCL1P09341 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL1P09341 AC025594.3-201ENST00000613068 790 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 AL449363.1-201ENST00000617815 186 ntBASIC1.69□□□□□ -2.14
CXCL1P09341 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms