Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.95□□□□□ -1.62
APPP05067 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
APPP05067 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
APPP05067 AC116667.1-201ENST00000604855 2072 ntBASIC4.95□□□□□ -1.62
APPP05067 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.95□□□□□ -1.62
APPP05067 AC027287.1-201ENST00000553115 1453 ntBASIC4.94□□□□□ -1.62
APPP05067 AC066616.2-201ENST00000559334 1481 ntBASIC4.94□□□□□ -1.62
APPP05067 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.94□□□□□ -1.62
APPP05067 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
APPP05067 RNA5SP130-201ENST00000364431 114 ntBASIC4.94□□□□□ -1.62
APPP05067 SNORD51-201ENST00000384320 80 ntBASIC4.94□□□□□ -1.62
APPP05067 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.94□□□□□ -1.62
APPP05067 RPS4XP8-201ENST00000402039 771 ntBASIC4.94□□□□□ -1.62
APPP05067 AL138878.1-201ENST00000405131 347 ntBASIC4.94□□□□□ -1.62
APPP05067 RNU2-8P-201ENST00000410727 190 ntBASIC4.94□□□□□ -1.62
APPP05067 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.94□□□□□ -1.62
APPP05067 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.94□□□□□ -1.62
APPP05067 TIMM9P3-201ENST00000428659 274 ntBASIC4.94□□□□□ -1.62
APPP05067 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.94□□□□□ -1.62
APPP05067 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.94□□□□□ -1.62
APPP05067 MTND5P20-201ENST00000448677 143 ntBASIC4.94□□□□□ -1.62
APPP05067 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.94□□□□□ -1.62
APPP05067 NUTF2P7-201ENST00000453086 375 ntBASIC4.94□□□□□ -1.62
APPP05067 AC007967.1-201ENST00000455422 1159 ntBASIC4.94□□□□□ -1.62
APPP05067 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.94□□□□□ -1.62
APPP05067 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.94□□□□□ -1.62
APPP05067 AC091951.2-201ENST00000500762 203 ntBASIC4.94□□□□□ -1.62
APPP05067 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.94□□□□□ -1.62
APPP05067 RN7SKP82-201ENST00000516786 223 ntBASIC4.94□□□□□ -1.62
APPP05067 Y_RNA.702-201ENST00000516843 96 ntBASIC4.94□□□□□ -1.62
APPP05067 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.94□□□□□ -1.62
APPP05067 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.94□□□□□ -1.62
APPP05067 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 MTND6P33-201ENST00000571794 183 ntBASIC4.94□□□□□ -1.62
APPP05067 RPL23AP87-202ENST00000573039 466 ntBASIC4.94□□□□□ -1.62
APPP05067 AC008752.3-201ENST00000588113 712 ntBASIC4.94□□□□□ -1.62
APPP05067 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.94□□□□□ -1.62
APPP05067 AL121992.2-201ENST00000606262 256 ntBASIC4.94□□□□□ -1.62
APPP05067 AC103710.2-201ENST00000609912 942 ntBASIC4.94□□□□□ -1.62
APPP05067 AC002550.2-201ENST00000621246 394 ntBASIC4.94□□□□□ -1.62
APPP05067 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
APPP05067 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
APPP05067 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.94□□□□□ -1.62
APPP05067 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.94□□□□□ -1.62
APPP05067 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.93□□□□□ -1.62
APPP05067 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.93□□□□□ -1.62
APPP05067 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
APPP05067 Y_RNA.160-201ENST00000363677 92 ntBASIC4.93□□□□□ -1.62
APPP05067 SNORD74.4-201ENST00000364129 80 ntBASIC4.93□□□□□ -1.62
APPP05067 RPS3AP24-201ENST00000407896 734 ntBASIC4.93□□□□□ -1.62
APPP05067 RNA5SP56-201ENST00000410277 118 ntBASIC4.93□□□□□ -1.62
APPP05067 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
APPP05067 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
APPP05067 USP9YP8-201ENST00000441913 500 ntBASIC4.93□□□□□ -1.62
APPP05067 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.93□□□□□ -1.62
APPP05067 AL136380.1-201ENST00000447970 162 ntBASIC4.93□□□□□ -1.62
APPP05067 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.93□□□□□ -1.62
APPP05067 RPS26P28-201ENST00000470806 348 ntBASIC4.93□□□□□ -1.62
APPP05067 AC233702.1-201ENST00000482905 502 ntBASIC4.93□□□□□ -1.62
APPP05067 AC079382.1-201ENST00000493346 557 ntBASIC4.93□□□□□ -1.62
APPP05067 NIPA2P2-201ENST00000496376 1083 ntBASIC4.93□□□□□ -1.62
APPP05067 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.93□□□□□ -1.62
APPP05067 NOL8P1-201ENST00000508336 3529 ntBASIC4.93□□□□□ -1.62
APPP05067 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.93□□□□□ -1.62
APPP05067 MIR2114-201ENST00000516645 80 ntBASIC4.93□□□□□ -1.62
APPP05067 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.93□□□□□ -1.62
APPP05067 AC022790.1-201ENST00000522872 204 ntBASIC4.93□□□□□ -1.62
APPP05067 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.93□□□□□ -1.62
APPP05067 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.93□□□□□ -1.62
APPP05067 AL161713.1-201ENST00000555538 145 ntBASIC4.93□□□□□ -1.62
APPP05067 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.93□□□□□ -1.62
APPP05067 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.93□□□□□ -1.62
APPP05067 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.93□□□□□ -1.62
APPP05067 AL669831.4-202ENST00000590817 238 ntBASIC4.93□□□□□ -1.62
APPP05067 AC020910.2-201ENST00000603635 610 ntBASIC4.93□□□□□ -1.62
APPP05067 BNIP3P9-201ENST00000603714 553 ntBASIC4.93□□□□□ -1.62
APPP05067 MIR6867-201ENST00000610636 67 ntBASIC4.93□□□□□ -1.62
APPP05067 AC064801.1-201ENST00000612025 407 ntBASIC4.93□□□□□ -1.62
APPP05067 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.93□□□□□ -1.62
APPP05067 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.93□□□□□ -1.62
APPP05067 MIR7702-201ENST00000621931 59 ntBASIC4.93□□□□□ -1.62
APPP05067 MIR4727-201ENST00000622232 55 ntBASIC4.93□□□□□ -1.62
APPP05067 C2orf27A-204ENST00000623058 969 ntBASIC4.93□□□□□ -1.62
APPP05067 AC009161.2-201ENST00000624626 138 ntBASIC4.93□□□□□ -1.62
APPP05067 AC068724.3-201ENST00000625906 87 ntBASIC4.93□□□□□ -1.62
APPP05067 AC024614.3-201ENST00000637860 256 ntBASIC4.93□□□□□ -1.62
APPP05067 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.93□□□□□ -1.62
APPP05067 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APPP05067 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.93□□□□□ -1.62
APPP05067 ZNF680P1-201ENST00000436625 1469 ntBASIC4.93□□□□□ -1.62
APPP05067 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APPP05067 SAGE2P-201ENST00000420011 2126 ntBASIC4.93□□□□□ -1.62
APPP05067 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APPP05067 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms