Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LDLRP01130 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
LDLRP01130 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
LDLRP01130 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDLRP01130 RNU5E-4P-201ENST00000364931 120 ntBASIC3.58□□□□□ -1.84
LDLRP01130 RNVU1-14-201ENST00000384770 164 ntBASIC3.58□□□□□ -1.84
LDLRP01130 MIR184-201ENST00000384962 84 ntBASIC3.58□□□□□ -1.84
LDLRP01130 RN7SKP285-201ENST00000410137 318 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDLRP01130 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 MED14P1-201ENST00000430517 648 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 COX6CP2-201ENST00000444980 225 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AL671855.1-201ENST00000446875 1203 ntBASIC3.58□□□□□ -1.84
LDLRP01130 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.58□□□□□ -1.84
LDLRP01130 RN7SL293P-201ENST00000481765 281 ntBASIC3.58□□□□□ -1.84
LDLRP01130 MTAPP1-201ENST00000489154 819 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 MTND2P33-201ENST00000506452 1031 ntBASIC3.58□□□□□ -1.84
LDLRP01130 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 AC026784.1-201ENST00000507986 352 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.58□□□□□ -1.84
LDLRP01130 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 AC093677.1-201ENST00000514414 678 ntBASIC3.58□□□□□ -1.84
LDLRP01130 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.58□□□□□ -1.84
LDLRP01130 RNU6-352P-201ENST00000516908 107 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 AC087369.1-201ENST00000520775 996 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.58□□□□□ -1.84
LDLRP01130 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.58□□□□□ -1.84
LDLRP01130 AC087499.8-201ENST00000578406 226 ntBASIC3.58□□□□□ -1.84
LDLRP01130 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.58□□□□□ -1.84
LDLRP01130 AC126118.1-201ENST00000607744 628 ntBASIC3.58□□□□□ -1.84
LDLRP01130 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDLRP01130 AC008498.1-201ENST00000613012 531 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AC005344.1-201ENST00000613391 459 ntBASIC3.58□□□□□ -1.84
LDLRP01130 MIR7975-201ENST00000619350 68 ntBASIC3.58□□□□□ -1.84
LDLRP01130 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.58□□□□□ -1.84
LDLRP01130 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDLRP01130 AP004289.2-201ENST00000444413 1457 ntBASIC3.58□□□□□ -1.84
LDLRP01130 AP002001.2-201ENST00000529025 1469 ntBASIC3.58□□□□□ -1.84
LDLRP01130 PABPC1P9-201ENST00000426076 1612 ntBASIC3.58□□□□□ -1.84
LDLRP01130 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDLRP01130 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.58□□□□□ -1.84
LDLRP01130 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 RNU5F-7P-201ENST00000363696 115 ntBASIC3.57□□□□□ -1.84
LDLRP01130 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.57□□□□□ -1.84
LDLRP01130 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 MIR607-201ENST00000385241 96 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AC109780.2-201ENST00000413467 845 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AC092447.6-201ENST00000414578 210 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AC007390.1-201ENST00000415722 356 ntBASIC3.57□□□□□ -1.84
LDLRP01130 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.57□□□□□ -1.84
LDLRP01130 CYCSP46-201ENST00000423569 204 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 DPPA2P1-201ENST00000428060 556 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.57□□□□□ -1.84
LDLRP01130 OR2B8P-201ENST00000432841 938 ntBASIC3.57□□□□□ -1.84
LDLRP01130 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.57□□□□□ -1.84
LDLRP01130 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.57□□□□□ -1.84
LDLRP01130 RPS11P1-201ENST00000451072 473 ntBASIC3.57□□□□□ -1.84
LDLRP01130 RPL31P13-201ENST00000484151 370 ntBASIC3.57□□□□□ -1.84
LDLRP01130 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 COX7A2P2-201ENST00000505291 250 ntBASIC3.57□□□□□ -1.84
LDLRP01130 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
LDLRP01130 POU5F1P7-201ENST00000508759 541 ntBASIC3.57□□□□□ -1.84
LDLRP01130 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.57□□□□□ -1.84
LDLRP01130 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
LDLRP01130 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.57□□□□□ -1.84
LDLRP01130 ARL2BPP6-201ENST00000512757 439 ntBASIC3.57□□□□□ -1.84
LDLRP01130 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.57□□□□□ -1.84
LDLRP01130 RNU6-405P-201ENST00000516637 110 ntBASIC3.57□□□□□ -1.84
LDLRP01130 OR5AP1P-201ENST00000529730 940 ntBASIC3.57□□□□□ -1.84
LDLRP01130 AP004247.1-201ENST00000531556 1289 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms