Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAPGEF3O95398 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.27□□□□□ -1.57
RAPGEF3O95398 AC139713.2-215ENST00000641428 5037 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAPGEF3O95398 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAPGEF3O95398 Y_RNA.46-201ENST00000362695 102 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AL356421.1-201ENST00000403255 413 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 RPL7P25-201ENST00000404151 721 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAPGEF3O95398 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 AP1S2P1-201ENST00000457344 379 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 HMGB1P19-201ENST00000517578 577 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AC134698.4-201ENST00000523451 826 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AL161713.1-201ENST00000555538 145 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 HMGB3P26-201ENST00000560051 582 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AL157394.1-201ENST00000562983 1224 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 OR4G1P-201ENST00000588632 938 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 RNU6-87P-201ENST00000607561 108 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 AC136475.10-201ENST00000620253 385 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 MIR4496-201ENST00000635896 61 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 AL596275.2-204ENST00000641628 552 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 AL596275.2-206ENST00000641957 626 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 OR5H6-203ENST00000642105 978 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 Z83843.1-201ENST00000604070 3685 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAPGEF3O95398 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAPGEF3O95398 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAPGEF3O95398 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.26□□□□□ -1.57
RAPGEF3O95398 AC095050.2-201ENST00000510748 1458 ntBASIC5.26□□□□□ -1.57
RAPGEF3O95398 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAPGEF3O95398 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAPGEF3O95398 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAPGEF3O95398 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAPGEF3O95398 ZNF734P-201ENST00000419494 1534 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAPGEF3O95398 RNU6-7-201ENST00000364784 107 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 RNU6-8-201ENST00000365467 107 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 AL078595.1-201ENST00000404458 226 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 RNU2-8P-201ENST00000410727 190 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 HMGB3P20-201ENST00000417997 600 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 MRPS10P2-201ENST00000431226 381 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 UBE2V1P8-201ENST00000437166 265 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 RPL17P49-201ENST00000443728 411 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 NPM1P49-201ENST00000448027 714 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 PSPHP1-201ENST00000450062 261 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 RPS20P32-201ENST00000456044 356 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 snoU13.8-201ENST00000458890 104 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 KCTD9P5-201ENST00000504141 1170 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 AC025588.3-201ENST00000604182 274 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 AL009028.1-201ENST00000604895 802 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 AP000860.1-201ENST00000605250 559 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 AL592295.2-201ENST00000612578 206 ntBASIC5.25□□□□□ -1.57
RAPGEF3O95398 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAPGEF3O95398 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RAPGEF3O95398 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.25□□□□□ -1.57
RAPGEF3O95398 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC007390.2-201ENST00000606229 3803 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAPGEF3O95398 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAPGEF3O95398 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 OTUD4P1-201ENST00000237841 3067 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RAPGEF3O95398 RNA5SP258-201ENST00000362750 119 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 RNVU1-3-201ENST00000364313 161 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AL359643.1-201ENST00000404109 423 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 RN7SKP111-201ENST00000410349 271 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 MTND1P21-201ENST00000412991 285 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RAPGEF3O95398 RPL7P52-201ENST00000449200 742 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 RPL5P30-201ENST00000465511 891 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 TRBV12-2-201ENST00000489763 344 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC006390.1-201ENST00000508068 283 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 Y_RNA.672-201ENST00000516289 104 ntBASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.24□□□□□ -1.57
RAPGEF3O95398 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms