Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.04□□□□□ -2.08
SSNA1O43805 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.04□□□□□ -2.08
SSNA1O43805 AC061975.8-201ENST00000587058 721 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 ATP1B3P1-201ENST00000605365 821 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC135507.1-201ENST00000607214 561 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 DUXAP10-204ENST00000612052 616 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.04□□□□□ -2.08
SSNA1O43805 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SSNA1O43805 OR4G2P-202ENST00000641004 1759 ntBASIC2.04□□□□□ -2.08
SSNA1O43805 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.04□□□□□ -2.08
SSNA1O43805 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SSNA1O43805 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SSNA1O43805 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SSNA1O43805 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SSNA1O43805 SNORA38-201ENST00000363946 132 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 SNORA51.11-201ENST00000384442 131 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 MIR585-201ENST00000384887 94 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.03□□□□□ -2.08
SSNA1O43805 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.03□□□□□ -2.08
SSNA1O43805 RNU7-140P-201ENST00000459546 60 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AC008427.1-201ENST00000503102 655 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SSNA1O43805 COL6A4P2-205ENST00000509855 506 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 SNORA31.22-201ENST00000517204 135 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AC022634.1-201ENST00000520765 532 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.03□□□□□ -2.08
SSNA1O43805 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SSNA1O43805 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.03□□□□□ -2.08
SSNA1O43805 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.03□□□□□ -2.08
SSNA1O43805 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.03□□□□□ -2.08
SSNA1O43805 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.03□□□□□ -2.08
SSNA1O43805 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.03□□□□□ -2.08
SSNA1O43805 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.03□□□□□ -2.08
SSNA1O43805 ISCA1P3-201ENST00000577104 373 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
SSNA1O43805 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.03□□□□□ -2.08
SSNA1O43805 AL022067.1-201ENST00000602426 454 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 KATNBL1P1-201ENST00000605192 748 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SSNA1O43805 MIR7112-201ENST00000616126 65 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.03□□□□□ -2.08
SSNA1O43805 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AC068057.2-201ENST00000624047 895 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AC080188.3-201ENST00000624842 748 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AC007785.2-201ENST00000598627 1916 ntBASIC2.03□□□□□ -2.08
SSNA1O43805 AL161912.2-201ENST00000565707 3007 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 MTND4P1-201ENST00000457501 1466 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.02□□□□□ -2.09
SSNA1O43805 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSNA1O43805 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.02□□□□□ -2.09
SSNA1O43805 AC080128.1-201ENST00000474389 1917 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSNA1O43805 RNU6-839P-201ENST00000363347 108 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 RNU1-112P-201ENST00000364401 164 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 RNU6-76P-201ENST00000384060 104 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 RNU6-481P-201ENST00000384194 107 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 MIR514A1-201ENST00000385133 98 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 RNU6-220P-201ENST00000390919 107 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 TMSB4XP8-201ENST00000402089 135 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AL133264.1-201ENST00000407157 562 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 RN7SKP202-201ENST00000410439 330 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 RNU2-28P-201ENST00000410457 189 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 TMSB4XP6-201ENST00000415187 135 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 BOLA3P4-201ENST00000418151 400 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 SFR1P2-201ENST00000421841 730 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 TMSB4XP1-201ENST00000424567 135 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AC018644.1-201ENST00000429934 551 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 IPO7P1-201ENST00000442031 636 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AL133547.1-201ENST00000448546 220 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 TRGVB-201ENST00000453257 471 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 ANKRD26P4-201ENST00000455755 950 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AC104435.1-201ENST00000483483 166 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.02□□□□□ -2.09
SSNA1O43805 XKRY-201ENST00000510392 1100 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 SNORA48.10-201ENST00000516965 160 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.02□□□□□ -2.09
SSNA1O43805 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.02□□□□□ -2.09
SSNA1O43805 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 AC124947.2-202ENST00000552735 133 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.02□□□□□ -2.09
SSNA1O43805 MIR5004-201ENST00000579078 107 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 OR4K7P-201ENST00000580232 945 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.02□□□□□ -2.09
SSNA1O43805 AL450472.3-201ENST00000615578 367 ntBASIC2.02□□□□□ -2.09
SSNA1O43805 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.02□□□□□ -2.09
SSNA1O43805 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.02□□□□□ -2.09
SSNA1O43805 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SSNA1O43805 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.02□□□□□ -2.09
SSNA1O43805 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.02□□□□□ -2.09
SSNA1O43805 ZNF849P-201ENST00000594711 1566 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms