Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PROM1O43490 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 RNU4-73P-201ENST00000363164 141 ntBASIC4.13□□□□□ -1.75
PROM1O43490 RNU4-76P-201ENST00000364509 141 ntBASIC4.13□□□□□ -1.75
PROM1O43490 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PROM1O43490 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.13□□□□□ -1.75
PROM1O43490 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 RNU6-767P-201ENST00000384132 107 ntBASIC4.13□□□□□ -1.75
PROM1O43490 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PROM1O43490 RNU6-1158P-201ENST00000391167 107 ntBASIC4.13□□□□□ -1.75
PROM1O43490 SDCBPP3-201ENST00000419629 891 ntBASIC4.13□□□□□ -1.75
PROM1O43490 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.13□□□□□ -1.75
PROM1O43490 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.13□□□□□ -1.75
PROM1O43490 AC140076.1-201ENST00000449897 361 ntBASIC4.13□□□□□ -1.75
PROM1O43490 RPL39P36-201ENST00000490784 156 ntBASIC4.13□□□□□ -1.75
PROM1O43490 AC021146.1-201ENST00000511202 716 ntBASIC4.13□□□□□ -1.75
PROM1O43490 HIGD1AP3-201ENST00000515857 278 ntBASIC4.13□□□□□ -1.75
PROM1O43490 SNORA40.12-201ENST00000516329 111 ntBASIC4.13□□□□□ -1.75
PROM1O43490 RNU6-410P-201ENST00000517006 107 ntBASIC4.13□□□□□ -1.75
PROM1O43490 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.13□□□□□ -1.75
PROM1O43490 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.13□□□□□ -1.75
PROM1O43490 MIR3939-201ENST00000582614 106 ntBASIC4.13□□□□□ -1.75
PROM1O43490 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.13□□□□□ -1.75
PROM1O43490 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.13□□□□□ -1.75
PROM1O43490 KC877982.1-201ENST00000602313 470 ntBASIC4.13□□□□□ -1.75
PROM1O43490 YWHAQP7-201ENST00000603536 658 ntBASIC4.13□□□□□ -1.75
PROM1O43490 AC090948.1-201ENST00000607464 549 ntBASIC4.13□□□□□ -1.75
PROM1O43490 AL354950.2-201ENST00000617939 290 ntBASIC4.13□□□□□ -1.75
PROM1O43490 uc_338.13-201ENST00000618243 179 ntBASIC4.13□□□□□ -1.75
PROM1O43490 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 AC100810.6-201ENST00000638068 285 ntBASIC4.13□□□□□ -1.75
PROM1O43490 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.13□□□□□ -1.75
PROM1O43490 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 RPS4XP5-202ENST00000449995 1334 ntBASIC4.13□□□□□ -1.75
PROM1O43490 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.13□□□□□ -1.75
PROM1O43490 MTND5P17-201ENST00000418405 1603 ntBASIC4.13□□□□□ -1.75
PROM1O43490 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PROM1O43490 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PROM1O43490 AC008725.1-201ENST00000605123 2263 ntBASIC4.12□□□□□ -1.75
PROM1O43490 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PROM1O43490 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PROM1O43490 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
PROM1O43490 MIR331-201ENST00000362302 94 ntBASIC4.12□□□□□ -1.75
PROM1O43490 RNY3P13-201ENST00000365542 102 ntBASIC4.12□□□□□ -1.75
PROM1O43490 MIR1911-201ENST00000410783 80 ntBASIC4.12□□□□□ -1.75
PROM1O43490 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.12□□□□□ -1.75
PROM1O43490 MTCO3P12-201ENST00000416718 547 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.12□□□□□ -1.75
PROM1O43490 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.12□□□□□ -1.75
PROM1O43490 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.12□□□□□ -1.75
PROM1O43490 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.12□□□□□ -1.75
PROM1O43490 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.12□□□□□ -1.75
PROM1O43490 AC011998.1-201ENST00000433403 117 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.12□□□□□ -1.75
PROM1O43490 TIMM9P1-201ENST00000436122 256 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AL138799.3-201ENST00000438968 350 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC079781.2-201ENST00000446424 169 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.12□□□□□ -1.75
PROM1O43490 AC104308.1-201ENST00000454621 333 ntBASIC4.12□□□□□ -1.75
PROM1O43490 RPL35AP15-201ENST00000468042 339 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC011276.1-201ENST00000469688 323 ntBASIC4.12□□□□□ -1.75
PROM1O43490 RPS3AP50-201ENST00000487064 803 ntBASIC4.12□□□□□ -1.75
PROM1O43490 RN7SL810P-201ENST00000493031 276 ntBASIC4.12□□□□□ -1.75
PROM1O43490 SCARNA24.1-201ENST00000516465 137 ntBASIC4.12□□□□□ -1.75
PROM1O43490 IGLVIV-65-201ENST00000517313 360 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.12□□□□□ -1.75
PROM1O43490 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.12□□□□□ -1.75
PROM1O43490 IFITM8P-201ENST00000522529 394 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
PROM1O43490 OR4P1P-201ENST00000530808 1136 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.12□□□□□ -1.75
PROM1O43490 AC243972.3-201ENST00000539655 198 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC125611.2-201ENST00000551907 647 ntBASIC4.12□□□□□ -1.75
PROM1O43490 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.12□□□□□ -1.75
PROM1O43490 OR4T1P-201ENST00000554933 911 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.12□□□□□ -1.75
PROM1O43490 AC018638.8-201ENST00000588755 281 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.12□□□□□ -1.75
PROM1O43490 AC004853.1-201ENST00000604902 698 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AL590099.1-201ENST00000615276 138 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AL021997.2-201ENST00000615674 271 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PROM1O43490 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
PROM1O43490 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PROM1O43490 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PROM1O43490 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PROM1O43490 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
PROM1O43490 AC009902.3-201ENST00000606235 2172 ntBASIC4.12□□□□□ -1.75
PROM1O43490 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.11□□□□□ -1.75
PROM1O43490 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.11□□□□□ -1.75
PROM1O43490 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PROM1O43490 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms