Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MTND1P18-201ENST00000448191 573 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 HMGB3P22-202ENST00000451823 572 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM38O00635 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 AC013267.1-201ENST00000458227 267 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 snoU13.24-201ENST00000458998 104 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM38O00635 MTCYBP18-201ENST00000501056 747 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 RNU6-201P-201ENST00000517100 61 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 RNU1-45P-201ENST00000517191 141 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC109635.4-202ENST00000531666 412 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AP004242.1-201ENST00000533701 349 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
TRIM38O00635 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM38O00635 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM38O00635 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 MIR548AB-201ENST00000584917 84 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM38O00635 AC025946.2-201ENST00000603398 234 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC027807.2-201ENST00000616099 408 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC104010.1-201ENST00000616889 150 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 AC007546.1-201ENST00000619452 559 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM38O00635 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM38O00635 AC092125.1-201ENST00000562568 1995 ntBASIC4.16□□□□□ -1.74
TRIM38O00635 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM38O00635 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM38O00635 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM38O00635 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
TRIM38O00635 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
TRIM38O00635 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TRIM38O00635 RNU6-1078P-201ENST00000364522 103 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 SNORA51.2-201ENST00000364595 132 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TRIM38O00635 Y_RNA.548-201ENST00000384656 105 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 MIR554-201ENST00000384874 96 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 RNU11-4P-201ENST00000391149 133 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 RPL7P25-201ENST00000404151 721 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 CCNG1P1-201ENST00000406783 885 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 RN7SKP56-201ENST00000410513 331 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AC233728.2-201ENST00000425348 757 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 ARPC3P1-201ENST00000437218 533 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 USP9YP12-201ENST00000450481 570 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AC010285.1-201ENST00000470580 392 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 RBM43P1-201ENST00000476891 1081 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AC110792.1-201ENST00000491826 472 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AP002812.1-201ENST00000495378 474 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM38O00635 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TRIM38O00635 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM38O00635 MTCO3P9-201ENST00000506989 781 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TRIM38O00635 AC022483.1-201ENST00000514020 567 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 RNA5SP73-201ENST00000516744 108 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM38O00635 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM38O00635 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM38O00635 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.15□□□□□ -1.75
TRIM38O00635 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM38O00635 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM38O00635 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM38O00635 RN7SL703P-201ENST00000578485 302 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM38O00635 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM38O00635 AC053481.4-201ENST00000583164 216 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM38O00635 AC022432.1-201ENST00000595739 310 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM38O00635 AC112191.3-201ENST00000604371 277 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AL590282.1-201ENST00000610379 1136 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AC108479.2-201ENST00000617314 601 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AC015967.1-201ENST00000619893 476 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 AL360181.4-201ENST00000621752 134 ntBASIC4.15□□□□□ -1.75
TRIM38O00635 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
TRIM38O00635 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM38O00635 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
TRIM38O00635 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM38O00635 USP8P1-201ENST00000494673 3183 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM38O00635 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
TRIM38O00635 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
TRIM38O00635 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TRIM38O00635 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM38O00635 RNU6-1074P-201ENST00000383995 104 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 Y_RNA.598-201ENST00000410480 95 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 Y_RNA.608-201ENST00000410647 95 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 CYCSP19-201ENST00000411715 316 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 AC108032.1-201ENST00000416706 207 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AL161631.1-201ENST00000417933 486 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 TOMM22P1-201ENST00000418578 312 ntBASIC4.14□□□□□ -1.75
TRIM38O00635 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.14□□□□□ -1.75
TRIM38O00635 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.14□□□□□ -1.75
TRIM38O00635 RPS29P7-201ENST00000439662 171 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms