Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC069200.1-201ENST00000609511 323 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 MIR3670-4-201ENST00000612260 65 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 AL357080.1-201ENST00000617394 239 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PDLIM1O00151 MTCO1P12-201ENST00000414273 1543 ntBASIC3.02□□□□□ -1.93
PDLIM1O00151 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM1O00151 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM1O00151 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDLIM1O00151 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM1O00151 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PDLIM1O00151 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
PDLIM1O00151 RNU6-173P-201ENST00000364215 104 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PDLIM1O00151 RNU6-1077P-201ENST00000410506 102 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.01□□□□□ -1.93
PDLIM1O00151 AC005019.1-201ENST00000436455 431 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 AL121871.1-201ENST00000443413 436 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 CYCSP35-201ENST00000451978 304 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 snoU13.8-201ENST00000458890 104 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC034236.1-201ENST00000469891 373 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 RPL31P50-201ENST00000471002 296 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC034244.1-201ENST00000507687 207 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM1O00151 RN7SKP265-201ENST00000516448 223 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 RNU5A-4P-201ENST00000516588 111 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM1O00151 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.01□□□□□ -1.93
PDLIM1O00151 OR6C7P-201ENST00000547875 934 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC087465.1-201ENST00000560574 245 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 OR4K8P-201ENST00000578842 1048 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 BNIP3P33-201ENST00000598912 569 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC234772.3-201ENST00000602277 528 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 DUXAP4-201ENST00000603046 613 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC024220.1-201ENST00000603675 484 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AL022099.1-201ENST00000604551 712 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AL592221.1-201ENST00000605266 382 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.01□□□□□ -1.93
PDLIM1O00151 TUG1_1.1-201ENST00000610654 145 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 AL596245.1-201ENST00000618994 362 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC012314.7-201ENST00000619693 93 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.01□□□□□ -1.93
PDLIM1O00151 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDLIM1O00151 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
PDLIM1O00151 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3□□□□□ -1.93
PDLIM1O00151 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3□□□□□ -1.93
PDLIM1O00151 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
PDLIM1O00151 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3□□□□□ -1.93
PDLIM1O00151 ASNSP3-201ENST00000451989 1306 ntBASIC3□□□□□ -1.93
PDLIM1O00151 ZNF807-201ENST00000328088 1707 ntBASIC3□□□□□ -1.93
PDLIM1O00151 RNU6-1155P-201ENST00000363554 107 ntBASIC3□□□□□ -1.93
PDLIM1O00151 SNORA4.1-201ENST00000364263 144 ntBASIC3□□□□□ -1.93
PDLIM1O00151 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
PDLIM1O00151 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
PDLIM1O00151 RNU6-157P-201ENST00000383957 107 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3□□□□□ -1.93
PDLIM1O00151 MTCO2P21-201ENST00000419780 677 ntBASIC3□□□□□ -1.93
PDLIM1O00151 BEND7P1-201ENST00000422058 457 ntBASIC3□□□□□ -1.93
PDLIM1O00151 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3□□□□□ -1.93
PDLIM1O00151 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3□□□□□ -1.93
PDLIM1O00151 AC233728.2-201ENST00000425348 757 ntBASIC3□□□□□ -1.93
PDLIM1O00151 MTCO1P39-201ENST00000426148 480 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AL451062.2-201ENST00000427515 271 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3□□□□□ -1.93
PDLIM1O00151 SNRPEP7-201ENST00000438350 220 ntBASIC3□□□□□ -1.93
PDLIM1O00151 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3□□□□□ -1.93
PDLIM1O00151 MTND5P14-201ENST00000441481 1267 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AC002381.1-201ENST00000447049 280 ntBASIC3□□□□□ -1.93
PDLIM1O00151 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3□□□□□ -1.93
PDLIM1O00151 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3□□□□□ -1.93
PDLIM1O00151 AC027673.1-201ENST00000456245 405 ntBASIC3□□□□□ -1.93
PDLIM1O00151 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3□□□□□ -1.93
PDLIM1O00151 FCF1P8-201ENST00000510322 597 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AC093677.1-201ENST00000514414 678 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3□□□□□ -1.93
PDLIM1O00151 DUXAP1-201ENST00000556632 463 ntBASIC3□□□□□ -1.93
PDLIM1O00151 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3□□□□□ -1.93
PDLIM1O00151 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3□□□□□ -1.93
PDLIM1O00151 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3□□□□□ -1.93
PDLIM1O00151 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3□□□□□ -1.93
PDLIM1O00151 AC025588.2-201ENST00000604851 466 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AC107952.2-201ENST00000606048 486 ntBASIC3□□□□□ -1.93
PDLIM1O00151 AC106028.5-201ENST00000610332 395 ntBASIC3□□□□□ -1.93
PDLIM1O00151 TUSC7.1-201ENST00000610969 165 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms