Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC025588.3-201ENST00000604182 274 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC012443.1-201ENST00000605605 231 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AP002826.1-201ENST00000608835 315 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 AC109454.4-201ENST00000623411 649 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 MKKS-204ENST00000639674 192 ntBASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CHKB-CPT1BH3BT56 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 RNA5SP276-201ENST00000362580 94 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 OR1L1-202ENST00000373686 1083 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC019129.1-201ENST00000403786 261 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AL450338.1-201ENST00000407987 512 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 CASKP1-201ENST00000412870 582 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AL392003.1-201ENST00000434394 243 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AL512661.1-201ENST00000434586 1253 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 FABP5P3-201ENST00000437960 408 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 PDSS1P2-201ENST00000449397 678 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC107398.1-201ENST00000486904 505 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU4-18P-201ENST00000516751 149 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 CDH12P4-201ENST00000517835 295 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 CDH12P3-201ENST00000517935 295 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 CDH12P1-201ENST00000518435 295 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 LINC00933-203ENST00000559812 219 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC007621.1-201ENST00000604544 437 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AL021707.7-201ENST00000607991 416 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC073592.7-201ENST00000623659 507 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC073308.1-201ENST00000623696 305 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 AC111188.2-201ENST00000529697 1387 ntBASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CHKB-CPT1BH3BT56 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RNA5SP125-201ENST00000364843 120 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU1-140P-201ENST00000365040 165 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR554-201ENST00000384874 96 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC068050.1-201ENST00000394891 380 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MTND4LP20-201ENST00000402379 270 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 BTF3P7-201ENST00000407097 488 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RN7SKP202-201ENST00000410439 330 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RN7SKP278-201ENST00000410504 342 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 HMGB1P11-201ENST00000413899 637 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 EIF1AXP1-201ENST00000419267 435 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 KRR1P1-201ENST00000419430 803 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RPL35AP12-201ENST00000425362 338 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 ARL5AP4-201ENST00000430731 512 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RPL7P29-201ENST00000437151 728 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC005297.2-201ENST00000450430 606 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC140059.1-201ENST00000489238 361 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC034222.1-201ENST00000494052 532 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6-970P-201ENST00000516312 107 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RNA5SP200-201ENST00000516360 103 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 RNU6-798P-201ENST00000516912 103 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC022080.3-201ENST00000544433 482 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 GTF2IP8-201ENST00000560687 584 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR3618-201ENST00000580330 88 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR5007-201ENST00000583098 95 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR5002-201ENST00000584713 97 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 UBE2L4-201ENST00000587688 464 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC016252.1-201ENST00000609721 474 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR7112-201ENST00000616126 65 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR6729-201ENST00000618194 65 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 MIR6719-201ENST00000622428 87 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC093591.3-201ENST00000634516 308 ntBASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.06□□□□□ -2.24
CHKB-CPT1BH3BT56 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms