Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC079248.2-201ENST00000623779 326 ntBASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 AC079597.1-201ENST00000624306 508 ntBASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 AC073073.2-201ENST00000609827 2578 ntBASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 AC092125.1-201ENST00000562568 1995 ntBASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.16□□□□□ -1.9
NPIPA3F8WFD2 CR383658.2-201ENST00000547576 1525 ntBASIC3.15□□□□□ -1.9
NPIPA3F8WFD2 RNU6-500P-201ENST00000362349 107 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 RNU6-76P-201ENST00000384060 104 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 RNU4-72P-201ENST00000410754 173 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 RNU6-516P-201ENST00000411381 104 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 RPS6P15-201ENST00000431996 751 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC005019.1-201ENST00000436455 431 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 MTND1P26-201ENST00000440488 538 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 RPL7P36-201ENST00000444633 681 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 MTCO2P6-201ENST00000463134 685 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 RN7SL594P-201ENST00000470590 287 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC109464.2-201ENST00000510242 943 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 UBE2L4-201ENST00000587688 464 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AL158801.5-201ENST00000623123 465 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC112204.3-201ENST00000623822 332 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC005832.2-201ENST00000538921 1430 ntBASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
NPIPA3F8WFD2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC011460.1-201ENST00000636268 1834 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 DEFB108F-201ENST00000344638 222 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 RNU5E-8P-201ENST00000363502 116 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 MIR493-201ENST00000385254 89 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 SNORA48.8-201ENST00000391324 134 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 SKINT1L-201ENST00000401057 817 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 RNA5SP120-201ENST00000410900 112 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 RN7SKP53-201ENST00000411337 315 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC109780.2-201ENST00000413467 845 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 VPS26BP1-201ENST00000417155 755 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 USP9YP26-201ENST00000421008 661 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 CETN4P-201ENST00000432407 469 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 HMGB3P8-201ENST00000449709 577 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 ZNF114P1-201ENST00000453500 292 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 MTND1P9-201ENST00000453775 944 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AP002884.2-201ENST00000471647 395 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC116347.2-201ENST00000514912 523 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 SNORA70.16-201ENST00000516390 95 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 SNORA31.22-201ENST00000517204 135 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 DEFB108D-201ENST00000527787 222 ntBASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.14□□□□□ -1.91
NPIPA3F8WFD2 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms