Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 MIR5685-201ENST00000579080 79 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 UBE2L4-201ENST00000587688 464 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 AC083760.1-201ENST00000589621 670 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 OR2AS2P-201ENST00000606902 342 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 AC011939.3-201ENST00000613686 466 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 AC068831.7-201ENST00000616954 363 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 XIST_intron.1-201ENST00000619444 68 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 AC006111.3-201ENST00000622137 383 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 MIR6810-201ENST00000622701 70 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 AL158801.5-201ENST00000623123 465 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 AC098679.4-201ENST00000624241 654 ntBASIC2.92□□□□□ -1.94
SRRM4A7MD48 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
SRRM4A7MD48 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SRRM4A7MD48 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SRRM4A7MD48 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SRRM4A7MD48 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SRRM4A7MD48 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SRRM4A7MD48 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SRRM4A7MD48 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 SNORA36C-201ENST00000384289 132 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 Y_RNA.560-201ENST00000384689 102 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 MIR493-201ENST00000385254 89 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 RPL32P23-201ENST00000397237 405 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 RPS4XP3-201ENST00000398541 413 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SRRM4A7MD48 RNU2-62P-201ENST00000410868 191 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC006989.1-201ENST00000427212 131 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SRRM4A7MD48 RPL17P49-201ENST00000443728 411 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 ELOCP30-201ENST00000447108 299 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 RPL31P3-201ENST00000458430 332 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC004801.2-202ENST00000463559 283 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC103987.1-201ENST00000473394 348 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 RAP1BP2-201ENST00000478270 544 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC055855.1-201ENST00000489563 579 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 PCBP2P3-201ENST00000509726 843 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC026402.1-201ENST00000513642 170 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC006077.1-201ENST00000604746 343 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC105129.3-201ENST00000605455 485 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC092653.1-201ENST00000608509 531 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AL138880.2-201ENST00000616214 239 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 PLCE1P1-201ENST00000622094 305 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC068724.3-201ENST00000625906 87 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 U6.98-201ENST00000637157 84 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 AC022336.2-201ENST00000568966 2538 ntBASIC2.91□□□□□ -1.94
SRRM4A7MD48 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
SRRM4A7MD48 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SRRM4A7MD48 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.94
SRRM4A7MD48 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SRRM4A7MD48 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SRRM4A7MD48 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SRRM4A7MD48 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SRRM4A7MD48 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SRRM4A7MD48 Y_RNA.97-201ENST00000363094 102 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 RNU5A-8P-201ENST00000364102 114 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 RNA5SP515-201ENST00000364570 118 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SRRM4A7MD48 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
SRRM4A7MD48 U8.11-201ENST00000384699 133 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 U8.12-201ENST00000384701 133 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 MIR514A1-201ENST00000385133 98 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 SNORD115.1-201ENST00000391109 76 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 RNU6-1197P-201ENST00000391183 107 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 AL021407.1-201ENST00000404531 386 ntBASIC2.9□□□□□ -1.95
SRRM4A7MD48 U3.42-201ENST00000408746 214 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms