Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.74□□□□□ -1.81
CGB1A6NKQ9 AC116096.1-201ENST00000566804 2314 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AL442639.1-201ENST00000625030 1899 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 ZFRP1-201ENST00000457579 2970 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 Y_RNA.22-201ENST00000362492 102 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNA5SP191-201ENST00000362585 102 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNU6-1249P-201ENST00000363237 111 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNU6-1309P-201ENST00000363305 108 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNA5SP507-201ENST00000363603 121 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 Y_RNA.187-201ENST00000363918 113 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 SNORA74A-201ENST00000364089 198 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNU6-522P-201ENST00000364497 107 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 Y_RNA.339-201ENST00000365325 102 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNU6-39P-201ENST00000384344 107 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNU6-907P-201ENST00000390924 102 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 OR6C66P-201ENST00000414917 930 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RPL23AP27-201ENST00000415161 451 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 MED13P1-201ENST00000428342 171 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 PRPF38AP2-201ENST00000438179 851 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RPL7P52-201ENST00000449200 742 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RPS5P7-201ENST00000456664 608 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RPL7L1P8-201ENST00000469911 741 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC021382.1-201ENST00000483523 359 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC083904.1-201ENST00000487828 231 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 FTH1P21-201ENST00000512179 511 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 RNU1-6P-201ENST00000516290 144 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC022634.1-201ENST00000520765 532 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AP005435.4-201ENST00000529514 284 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC021006.3-201ENST00000530771 192 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC022882.1-201ENST00000532142 501 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 HMGN2P6-201ENST00000551091 273 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 7SK.7-201ENST00000603504 247 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AL121992.2-201ENST00000606262 256 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC007546.1-201ENST00000619452 559 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC087385.3-201ENST00000620477 187 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AC091925.1-201ENST00000623204 462 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AP001784.1-201ENST00000624107 428 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AL359757.2-201ENST00000624309 274 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AL365440.1-201ENST00000436135 2167 ntBASIC3.73□□□□□ -1.81
CGB1A6NKQ9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CGB1A6NKQ9 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 AC108751.5-201ENST00000492880 1336 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 AL139276.1-201ENST00000311910 1001 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 RNU5A-8P-201ENST00000364102 114 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 SNORA7.2-201ENST00000364446 145 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 U3.11-201ENST00000364476 212 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 RNU6-574P-201ENST00000384265 107 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 RNU6-331P-201ENST00000384724 107 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 MIR558-201ENST00000384920 94 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 RNU6-903P-201ENST00000391270 109 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CGB1A6NKQ9 MIR548K-201ENST00000408406 116 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 RNU2-29P-201ENST00000410423 189 ntBASIC3.72□□□□□ -1.81
CGB1A6NKQ9 RNU4-14P-201ENST00000410858 122 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms