Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC110774.1-201ENST00000623567 2018 ntBASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
TRIM49BA6NDI0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 MIR181B1-201ENST00000385240 110 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 U3.19-201ENST00000390893 196 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 ARF4P3-201ENST00000397387 509 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 MTND2P18-201ENST00000419962 1030 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AL137014.1-201ENST00000420490 1226 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC009969.1-201ENST00000438726 172 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AL121871.1-201ENST00000443413 436 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 VN1R10P-201ENST00000447106 875 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 MRPS33P3-201ENST00000513456 322 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC005832.3-201ENST00000537929 631 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC109446.2-201ENST00000567872 497 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AL031281.1-201ENST00000604049 488 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC009220.3-201ENST00000604318 586 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC021749.1-201ENST00000604322 607 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AC072039.2-201ENST00000608883 439 ntBASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
TRIM49BA6NDI0 CUL1P1-201ENST00000509510 2425 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 RNU6-560P-201ENST00000364007 108 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 SNORD116-2-201ENST00000384274 95 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 SNORD116-6-201ENST00000384711 96 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 RN7SKP220-201ENST00000410611 288 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AL139421.1-201ENST00000423010 169 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 MTCO1P39-201ENST00000426148 480 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 USP9YP11-201ENST00000427537 717 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 MTND5P25-201ENST00000430499 799 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 RPS25P9-201ENST00000435591 252 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 RPS29P6-201ENST00000438196 145 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC004866.2-201ENST00000438285 481 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 MTND5P2-201ENST00000442927 1142 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 OR6C5P-201ENST00000452388 923 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC104308.1-201ENST00000454621 333 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 MTND2P14-201ENST00000482139 351 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 MTND4LP22-201ENST00000508209 276 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC010587.2-201ENST00000511727 448 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 RN7SKP57-201ENST00000517248 293 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC008015.1-201ENST00000555505 465 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 LARP7P2-201ENST00000575306 125 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AP005136.1-201ENST00000579765 429 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC013444.2-201ENST00000603317 787 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AL035425.3-201ENST00000564206 4996 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 AC092326.2-201ENST00000624772 1561 ntBASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM49BA6NDI0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM49BA6NDI0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms