Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC78A2IDD5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 XIAPP3-201ENST00000312918 795 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 Y_RNA.535-201ENST00000384612 99 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 SNORA11F-201ENST00000408237 128 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 RN7SKP177-201ENST00000410567 355 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 RNA5SP104-201ENST00000410989 118 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC092832.1-201ENST00000422934 400 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 RPS29P17-201ENST00000430795 166 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL606489.2-201ENST00000433886 234 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC104308.1-201ENST00000454621 333 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC108059.3-201ENST00000456388 214 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 RPS20P24-201ENST00000457473 361 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC025445.1-201ENST00000502728 300 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 RNA5SP337-201ENST00000517007 109 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AP003497.1-201ENST00000528472 562 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC123904.3-201ENST00000547218 814 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 HIF1AP1-201ENST00000553642 175 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 TVP23BP1-201ENST00000557500 617 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC023575.1-201ENST00000580510 358 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC060771.1-201ENST00000582031 164 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 UBE2L4-201ENST00000587688 464 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC018638.8-201ENST00000588755 281 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC011712.1-201ENST00000588959 234 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL669831.4-202ENST00000590817 238 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC020910.2-201ENST00000603635 610 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL139395.1-201ENST00000603662 160 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL136363.1-201ENST00000605349 337 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC024940.5-201ENST00000622889 474 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AL158801.5-201ENST00000623123 465 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 AC024614.3-201ENST00000637860 256 ntBASIC4.27□□□□□ -1.73
CCDC78A2IDD5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC78A2IDD5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 ZNF680P1-201ENST00000436625 1469 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 RNU6-767P-201ENST00000384132 107 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 RNU6-1158P-201ENST00000391167 107 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 RNA5SP56-201ENST00000410277 118 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 RNU4-78P-201ENST00000410940 126 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AL157831.1-201ENST00000426134 473 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC004975.1-201ENST00000428733 208 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 ELOCP18-201ENST00000434209 337 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AL353748.1-201ENST00000440753 474 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 NUTF2P7-201ENST00000453086 375 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC010618.1-201ENST00000469924 477 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 RNA5SP49-201ENST00000516450 115 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 Vault.1-201ENST00000516474 102 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC024224.1-201ENST00000538284 609 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 ARL2BPP2-201ENST00000550907 489 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC098848.2-201ENST00000588023 330 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 IGHV3-29-201ENST00000604817 344 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC004853.1-201ENST00000604902 698 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC010338.1-201ENST00000621823 717 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AL356585.4-201ENST00000623078 1229 ntBASIC4.26□□□□□ -1.73
CCDC78A2IDD5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC78A2IDD5 AC011266.1-201ENST00000624119 3569 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms