Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 Y_RNA.561-201ENST00000384694 100 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 RPL23AP17-201ENST00000401064 499 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AL645733.1-201ENST00000402250 217 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 MIR1302-4-201ENST00000408701 150 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC011742.1-201ENST00000431448 434 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 SEPT7P4-201ENST00000437076 306 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC005002.2-201ENST00000438228 269 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 UQCRBP2-201ENST00000447827 297 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC010733.1-201ENST00000451515 401 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 RNU6-953P-201ENST00000459154 107 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC108043.1-201ENST00000512696 574 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC137627.1-201ENST00000545761 289 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 RPL10P14-201ENST00000565265 298 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC127455.1-201ENST00000565496 145 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 MIR4646-201ENST00000580775 63 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 Mico1.1-201ENST00000611698 204 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC023043.4-201ENST00000612081 449 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 AC004852.3-201ENST00000614131 326 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 DDX10P1-201ENST00000448545 1933 ntBASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CCDC61Q9Y6R9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RNA5SP326-201ENST00000363209 110 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 SNORA40.19-201ENST00000390846 128 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RNA5SP251-201ENST00000410614 137 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RNU6-1064P-201ENST00000410626 104 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RNU5A-5P-201ENST00000411054 116 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RNU6-607P-201ENST00000411283 108 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AL162389.1-201ENST00000449233 177 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 VN1R105P-201ENST00000486595 910 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AL160314.1-201ENST00000490836 438 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RNU7-175P-201ENST00000515915 61 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RNU6-612P-201ENST00000516909 102 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AC067852.3-201ENST00000589177 561 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 RPL23AP78-201ENST00000599928 470 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AL355816.1-201ENST00000607951 118 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AC074101.1-201ENST00000637861 241 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 PANDAR-201ENST00000629595 1506 ntBASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CCDC61Q9Y6R9 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 Y_RNA.324-201ENST00000365165 102 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 U3.36-201ENST00000408418 213 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 GSTM5P1-201ENST00000434751 660 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 AC234775.1-201ENST00000454247 670 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 SCARNA16.4-201ENST00000516956 187 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 AP002799.1-201ENST00000623552 423 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 CYP4F35P-202ENST00000636121 390 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 AL731532.1-201ENST00000623972 4236 ntBASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC7.54□□□□□ -1.2
CCDC61Q9Y6R9 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 AC009951.1-201ENST00000623674 2614 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 MIR410-201ENST00000362222 80 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 RNU6-755P-201ENST00000364400 103 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 MIR513C-201ENST00000401352 84 ntBASIC7.53□□□□□ -1.2
CCDC61Q9Y6R9 RPL23AP26-201ENST00000412728 464 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms