Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 RNU6-352P-201ENST00000516908 107 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 SNORA17.5-201ENST00000630429 132 ntBASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.61□□□□□ -1.51
DNMT3AQ9Y6K1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AL353796.1-201ENST00000561542 3241 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AC073136.1-201ENST00000449426 2884 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 SNORA64.1-201ENST00000362600 132 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-1249P-201ENST00000363237 111 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5SP30-201ENST00000365552 115 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNU1-136P-201ENST00000384181 164 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5SP122-201ENST00000384457 108 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 MIR130A-201ENST00000385274 89 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNU2-43P-201ENST00000410306 190 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNA5SP178-201ENST00000410380 128 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RPLP0P7-201ENST00000416050 667 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RN7SL591P-201ENST00000496150 292 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-677P-201ENST00000516914 101 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AL158032.1-201ENST00000605401 106 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 AL450472.3-201ENST00000615578 367 ntBASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
DNMT3AQ9Y6K1 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-1130P-201ENST00000365434 107 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RPL21P67-201ENST00000402896 478 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RNU6-712P-201ENST00000410558 100 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RPL19P1-201ENST00000411635 428 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RPL23AP36-201ENST00000413895 458 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 FAR2P4-202ENST00000425399 584 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AL662874.1-201ENST00000426065 230 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 REG1CP-206ENST00000447469 496 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RNU7-169P-201ENST00000459456 61 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AC117503.1-201ENST00000472241 394 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AC026801.1-201ENST00000497178 464 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RNU5F-8P-201ENST00000515941 111 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 SCARNA24.2-201ENST00000516968 130 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 RPL23AP84-201ENST00000571193 464 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 MIR4505-201ENST00000582238 73 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AC060780.2-201ENST00000589047 198 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AL670379.2-201ENST00000604983 252 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 HMGN2P28-201ENST00000606102 262 ntBASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
DNMT3AQ9Y6K1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
DNMT3AQ9Y6K1 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
DNMT3AQ9Y6K1 AP002512.4-202ENST00000641599 4530 ntBASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 RNU6-151P-201ENST00000364158 107 ntBASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 SNORD116-18-201ENST00000383961 92 ntBASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 RNU6-356P-201ENST00000384140 107 ntBASIC5.58□□□□□ -1.52
DNMT3AQ9Y6K1 SNORA16.2-201ENST00000390991 127 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms