Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 MIR3176-201ENST00000582210 90 ntBASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 AL731566.2-201ENST00000618971 317 ntBASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 AC144833.1-201ENST00000567953 4089 ntBASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HRH3Q9Y5N1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 THAP12P5-201ENST00000405864 2275 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AC005224.3-201ENST00000584683 2140 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AL137141.1-201ENST00000624622 4836 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 RPS3AP2-201ENST00000407190 754 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 RNU4-78P-201ENST00000410940 126 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 MYL6P5-201ENST00000412707 459 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 RPL7AP73-201ENST00000413490 353 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AC098831.1-201ENST00000440661 216 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 ISCUP1-201ENST00000454451 448 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 RNU7-120P-201ENST00000459334 63 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 RN7SL72P-201ENST00000460697 269 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AC007686.1-201ENST00000488511 463 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 MIR2117-201ENST00000516780 80 ntBASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HRH3Q9Y5N1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 MAPK10-328ENST00000641553 4009 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 Y_RNA.506-201ENST00000384494 102 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RNU6-125P-201ENST00000384505 107 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 Y_RNA.534-201ENST00000384599 112 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RNU6-146P-201ENST00000384602 108 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 MIR301A-201ENST00000385261 86 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AL121835.1-201ENST00000404250 354 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RNA5SP494-201ENST00000410653 129 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RN7SKP293-201ENST00000411389 296 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AL096701.2-201ENST00000416920 238 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 SAGE2P-201ENST00000420011 2126 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 HMGN2P27-201ENST00000427352 270 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RANP8-201ENST00000444720 713 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RPS23P6-201ENST00000466136 431 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RPL7P49-201ENST00000471402 708 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 RNU6-941P-201ENST00000516346 108 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AL590705.4-201ENST00000532209 134 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AL442163.3-201ENST00000554110 156 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 MIR4300-201ENST00000581016 96 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 PRPF19P1-201ENST00000584766 898 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 Y_RNA.772-201ENST00000606692 102 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 MIR8076-201ENST00000611401 83 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 U73479.1-201ENST00000618062 168 ntBASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.34□□□□□ -1.55
HRH3Q9Y5N1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
HRH3Q9Y5N1 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HRH3Q9Y5N1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.34□□□□□ -1.56
HRH3Q9Y5N1 THAP12P9-201ENST00000503971 2360 ntBASIC5.34□□□□□ -1.56
HRH3Q9Y5N1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
HRH3Q9Y5N1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HRH3Q9Y5N1 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HRH3Q9Y5N1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms