Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA4Q9Y5G9 NCAPGP1-201ENST00000505112 1814 ntBASIC6.34□□□□□ -1.4
PCDHGA4Q9Y5G9 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGA4Q9Y5G9 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.34□□□□□ -1.4
PCDHGA4Q9Y5G9 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.34□□□□□ -1.4
PCDHGA4Q9Y5G9 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
PCDHGA4Q9Y5G9 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
PCDHGA4Q9Y5G9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 PPIAP24-201ENST00000328558 471 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 RNU6-199P-201ENST00000362954 107 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 RNA5SP77-201ENST00000365394 120 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 RNU6-741P-201ENST00000383889 107 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AL359092.1-201ENST00000417156 265 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AC107027.2-201ENST00000512197 115 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 RFPL4AP5-201ENST00000514977 504 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 IGKV2D-36-201ENST00000518643 226 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AC008489.1-201ENST00000524271 483 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 SMIM12P1-201ENST00000603004 274 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 SNORD96A-201ENST00000606577 79 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AL589743.6-201ENST00000611025 117 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 RMST_6.1-201ENST00000611980 203 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 AL445647.2-201ENST00000615170 130 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 MTND5P32-201ENST00000560711 1802 ntBASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PCDHGA4Q9Y5G9 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 Z95114.1-201ENST00000624264 14574 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC092593.1-201ENST00000515413 1815 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 MIR412-201ENST00000362142 91 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 RNA5SP197-201ENST00000363357 119 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 RNA5SP213-201ENST00000391031 106 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 UBA52P6-201ENST00000399822 382 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AL022722.2-201ENST00000402519 180 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 OR3A2-201ENST00000408891 1076 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC002553.3-201ENST00000453002 341 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AP000870.1-201ENST00000472927 406 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 RN7SL799P-201ENST00000475891 298 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC104164.2-201ENST00000496953 495 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 HIGD1AP3-201ENST00000515857 278 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC018442.3-201ENST00000523025 183 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 MIR5582-201ENST00000579697 68 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 AC114477.1-201ENST00000605097 605 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 MIR6729-201ENST00000618194 65 ntBASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.32□□□□□ -1.4
PCDHGA4Q9Y5G9 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 AL365440.1-201ENST00000436135 2167 ntBASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 LINC01109-201ENST00000603837 3081 ntBASIC6.31□□□□□ -1.4
PCDHGA4Q9Y5G9 RNU6-428P-201ENST00000362942 107 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms