Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 IRF5P1-201ENST00000504852 2164 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 RNU1-115P-201ENST00000365329 160 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 RNU6-1222P-201ENST00000384615 107 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 GLULP6-201ENST00000399502 913 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 AF186996.5-201ENST00000418098 904 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 USP9YP16-201ENST00000430287 407 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 AL591704.1-201ENST00000432574 275 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 AL162389.1-201ENST00000449233 177 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 FABP5P13-201ENST00000452144 328 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 USP9YP23-201ENST00000455085 407 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 RN7SL283P-201ENST00000489055 303 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 HMGB1P30-201ENST00000492455 606 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 RPL7P23-201ENST00000493874 747 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 TBCAP3-201ENST00000512475 312 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 Y_RNA.721-201ENST00000517207 102 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 GSTP1P1-201ENST00000548078 319 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 NDUFB4P11-201ENST00000560510 395 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 AC004696.1-201ENST00000614345 607 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 GVINP1-202ENST00000531871 7271 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 AL359893.1-201ENST00000447628 1580 ntBASIC5.41□□□□□ -1.54
CNTN3Q9P232 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CNTN3Q9P232 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
CNTN3Q9P232 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CNTN3Q9P232 THAP12P5-201ENST00000405864 2275 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CNTN3Q9P232 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CNTN3Q9P232 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CNTN3Q9P232 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
CNTN3Q9P232 PABPC1P7-201ENST00000413177 1513 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CNTN3Q9P232 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CNTN3Q9P232 RNA5SP87-201ENST00000384155 118 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 RNU6-821P-201ENST00000390995 107 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 Y_RNA.594-201ENST00000410373 140 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC008267.5-201ENST00000424928 265 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC236972.1-201ENST00000433225 199 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC093414.1-201ENST00000434712 514 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.4□□□□□ -1.54
CNTN3Q9P232 AL450023.3-201ENST00000440592 271 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 RPL7AP61-201ENST00000443410 636 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC112498.1-201ENST00000444401 332 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC007967.1-201ENST00000455422 1159 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC092324.1-201ENST00000468671 324 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC092451.1-201ENST00000480211 153 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AP001086.1-201ENST00000494882 321 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC021146.3-201ENST00000511911 260 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 RNU2-69P-201ENST00000516061 100 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 Y_RNA.670-201ENST00000516255 105 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 RNU6-307P-201ENST00000516743 106 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 IGKV2D-36-201ENST00000518643 226 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 OR8R1P-201ENST00000543943 764 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.4□□□□□ -1.54
CNTN3Q9P232 AC091953.3-201ENST00000623220 236 ntBASIC5.4□□□□□ -1.54
CNTN3Q9P232 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
CNTN3Q9P232 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.4□□□□□ -1.55
CNTN3Q9P232 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.4□□□□□ -1.55
CNTN3Q9P232 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTN3Q9P232 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTN3Q9P232 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CNTN3Q9P232 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.4□□□□□ -1.55
CNTN3Q9P232 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CNTN3Q9P232 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CNTN3Q9P232 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.4□□□□□ -1.55
CNTN3Q9P232 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 SCARNA15-201ENST00000607520 4325 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNTN3Q9P232 SET-203ENST00000372688 801 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 Y_RNA.404-201ENST00000383978 102 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 Y_RNA.428-201ENST00000384078 102 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 RNU6-784P-201ENST00000384330 106 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 SNORA70.10-201ENST00000384515 134 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 AL445189.1-201ENST00000405722 338 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 RNA5SP111-201ENST00000411386 101 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 CYCSP10-201ENST00000417973 294 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 RSL24D1P6-201ENST00000426934 401 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 HIGD1AP11-201ENST00000438361 280 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 AC245028.2-201ENST00000458673 253 ntBASIC5.39□□□□□ -1.55
CNTN3Q9P232 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.39□□□□□ -1.55
CNTN3Q9P232 AC083982.1-201ENST00000485679 344 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms