Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AC087359.1-201ENST00000508335 1740 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RNU6-582P-201ENST00000362989 107 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RPS15AP38-201ENST00000413110 372 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RPS7P9-201ENST00000414704 586 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RPL7P30-201ENST00000420888 709 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 EZH2P1-201ENST00000431167 291 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC112220.1-201ENST00000434628 355 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RPL23AP16-201ENST00000441715 421 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 MTND2P19-201ENST00000449129 1012 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 TRBV26-201ENST00000456572 344 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RPS3P1-201ENST00000456781 192 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 MTCO3P2-201ENST00000457365 171 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RNA5SP148-201ENST00000516527 94 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AP003102.1-201ENST00000525638 661 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC126177.3-201ENST00000551839 688 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 LSM6P2-201ENST00000552208 177 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 SULT1C2P1-202ENST00000562418 459 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC093519.1-201ENST00000566109 298 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC234778.2-201ENST00000566241 354 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 FAM60BP-201ENST00000578364 658 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 SNORD39.3-201ENST00000584451 71 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AP005137.2-201ENST00000609238 400 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC124016.2-201ENST00000610058 665 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC068880.5-201ENST00000624331 290 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 AC026634.1-201ENST00000634369 198 ntBASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXC10Q9NYD6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 SNORA51.4-201ENST00000364993 124 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 MIR627-201ENST00000384979 97 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AL356057.3-201ENST00000402607 340 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 OOSP1P1-201ENST00000423265 274 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 SUMO1P4-201ENST00000429430 302 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC005345.1-201ENST00000431868 217 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 RPL39P40-201ENST00000445481 146 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC090525.1-201ENST00000479116 478 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 NAMPTP2-201ENST00000505629 1115 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 ZNF705CP-201ENST00000530515 889 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 CYB5AP5-201ENST00000549779 389 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 MIR3605-201ENST00000583214 100 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC006116.7-201ENST00000590141 756 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC099785.1-201ENST00000605697 437 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AL020991.1-201ENST00000612314 373 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC109454.4-201ENST00000623411 649 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 GABRG2-229ENST00000641017 3628 ntBASIC3.1□□□□□ -1.91
HOXC10Q9NYD6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 MTCO1P56-201ENST00000401674 224 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 USP9YP21-201ENST00000420603 432 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 FNDC3CP-201ENST00000420795 1155 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 MYL8P-204ENST00000431574 518 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 MRPL42P4-201ENST00000453267 443 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 AC244505.3-201ENST00000454598 187 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 AC003982.1-202ENST00000469928 248 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 VPS26AP1-201ENST00000483197 979 ntBASIC3.09□□□□□ -1.91
HOXC10Q9NYD6 BOLA3P3-201ENST00000505182 232 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms