Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 OR5BR1P-201ENST00000524992 1330 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 PABPC1P7-201ENST00000413177 1513 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 ARF4P3-201ENST00000397387 509 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 SSXP10-201ENST00000402595 565 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 SNORD88.1-201ENST00000408684 91 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 SNORA11-201ENST00000408789 128 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL451074.5-201ENST00000415894 435 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC006366.1-201ENST00000422002 759 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC005517.2-201ENST00000424673 553 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC005019.1-201ENST00000436455 431 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 MTCO2P7-201ENST00000446518 666 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 MTCO1P48-201ENST00000448024 1096 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC009961.3-201ENST00000449832 765 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 RN7SL542P-201ENST00000467147 294 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 KLRA1P-201ENST00000503499 986 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 MTCO3P7-201ENST00000510008 774 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 MTCYBP43-201ENST00000513621 740 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC087276.1-201ENST00000529659 480 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC011611.1-201ENST00000552179 197 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC136618.2-201ENST00000575091 400 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC119751.7-201ENST00000600494 245 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL596327.1-201ENST00000603629 213 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC012557.2-201ENST00000605919 418 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL031775.1-201ENST00000607014 887 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC090425.2-201ENST00000608818 501 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AL356266.1-201ENST00000623311 483 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.7□□□□□ -1.82
UPF2Q9HAU5 AC007256.1-201ENST00000392253 2765 ntBASIC3.7□□□□□ -1.82
UPF2Q9HAU5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 SAGE4P-201ENST00000442271 3381 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 RNU6-253P-201ENST00000384730 105 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 MIR649-201ENST00000384843 97 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 RPL23AP39-201ENST00000415533 405 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 RPS3AP9-201ENST00000417027 792 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 MTCYBP24-201ENST00000420387 1106 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 Z99497.1-201ENST00000421282 135 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 RPL39P6-201ENST00000448289 150 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 USP9YP10-201ENST00000454868 628 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 RPL21P41-201ENST00000459863 264 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC092757.1-201ENST00000467293 467 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC072039.1-201ENST00000477611 581 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC078918.1-201ENST00000498515 228 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 RNF138P1-201ENST00000502765 546 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 SAP18P1-201ENST00000512058 390 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC104986.1-201ENST00000517978 436 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC024909.2-201ENST00000553035 286 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 RPL21P12-201ENST00000559810 515 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 MIR1254-2-201ENST00000579553 63 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC090616.5-202ENST00000582111 297 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 MTCYBP22-201ENST00000603788 447 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 MIR7844-201ENST00000616161 122 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC009509.4-201ENST00000619202 509 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC012442.3-202ENST00000636742 206 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.69□□□□□ -1.82
UPF2Q9HAU5 OR4G11P-202ENST00000642116 1414 ntBASIC3.69□□□□□ -1.82
UPF2Q9HAU5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
UPF2Q9HAU5 Y_RNA.18-201ENST00000362461 102 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 U3.4-201ENST00000363352 213 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 Y_RNA.194-201ENST00000363985 102 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 RNU6-777P-201ENST00000364265 104 ntBASIC3.68□□□□□ -1.82
UPF2Q9HAU5 RNA5SP189-201ENST00000364920 115 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms