Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC009812.4-201ENST00000569134 1805 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 RNU6-50P-201ENST00000362356 103 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 SNORD115.1-201ENST00000391109 76 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 SNORA26.8-201ENST00000391306 124 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 SKINT1L-201ENST00000401057 817 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 Z92545.1-201ENST00000411782 234 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 HMGN1P24-201ENST00000412282 298 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 NPM1P11-201ENST00000417106 855 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC233728.2-201ENST00000425348 757 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 MTND2P22-201ENST00000444325 1033 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 COX6CP2-201ENST00000444980 225 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 MTND2P4-201ENST00000445034 1004 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 RAC1P7-201ENST00000445367 377 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 CFTRP1-201ENST00000456646 183 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 RPL32P34-201ENST00000486380 400 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 RPL7P24-201ENST00000493052 752 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 HMGB3P15-201ENST00000507326 574 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC105313.1-201ENST00000509121 353 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 MTND4LP18-201ENST00000526864 291 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 ACTR3BP3-201ENST00000565577 979 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 ZNF192P1-203ENST00000565888 810 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 PIGPP4-201ENST00000584447 307 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AC010620.1-201ENST00000601088 1102 ntBASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.66□□□□□ -1.82
POLR1BQ9H9Y6 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
POLR1BQ9H9Y6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 RNU6-516P-201ENST00000411381 104 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 SSXP9-201ENST00000417503 292 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC079780.1-201ENST00000428259 207 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC090774.1-201ENST00000435925 246 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 HMGB1P37-201ENST00000439613 609 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 TRIM60P18-201ENST00000441518 828 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 RANP8-201ENST00000444720 713 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 RPS29P31-201ENST00000446147 164 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 RPS3AP46-201ENST00000448352 682 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 EPS15P1-201ENST00000448836 336 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 MTCO1P42-201ENST00000457379 726 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 RPL31P3-201ENST00000458430 332 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC105914.1-201ENST00000511798 226 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 RNU6-201P-201ENST00000517100 61 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 OR5B10P-201ENST00000532869 642 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 Z94722.1-201ENST00000604328 474 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AL359999.1-201ENST00000604513 294 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AL592295.2-201ENST00000612578 206 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AL450472.3-201ENST00000615578 367 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 AL159972.1-201ENST00000625150 448 ntBASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
POLR1BQ9H9Y6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1BQ9H9Y6 CEP170P1-201ENST00000502249 4587 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms