Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL445523.1-201ENST00000451184 1362 ntBASIC3.97□□□□□ -1.77
USP44Q9H0E7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.97□□□□□ -1.77
USP44Q9H0E7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP44Q9H0E7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
USP44Q9H0E7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 Y_RNA.234-201ENST00000364409 97 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 SNORD116-2-201ENST00000384274 95 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 SNORD116-6-201ENST00000384711 96 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP44Q9H0E7 MIR1183-201ENST00000408856 89 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC007899.1-201ENST00000412776 775 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 HMGB1P11-201ENST00000413899 637 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 AL353678.1-201ENST00000422735 741 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 RPL23AP69-201ENST00000431134 458 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 RPS3AP12-201ENST00000443616 753 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC017015.1-201ENST00000477387 286 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 RPS3AP43-201ENST00000479743 781 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 Y_RNA.688-201ENST00000516565 95 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 RNU6-759P-201ENST00000516740 103 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 RNU6-714P-201ENST00000516963 103 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 SNORA31.20-201ENST00000517111 133 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 SNORA70.24-201ENST00000517233 118 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 OR5D17P-201ENST00000531492 978 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AP004247.1-201ENST00000531556 1289 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 Z99497.2-201ENST00000603634 310 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC110741.2-201ENST00000605278 268 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC002550.2-201ENST00000621246 394 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 AC091903.1-201ENST00000624322 454 ntBASIC3.96□□□□□ -1.78
USP44Q9H0E7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP44Q9H0E7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
USP44Q9H0E7 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.96□□□□□ -1.78
USP44Q9H0E7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP44Q9H0E7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP44Q9H0E7 FRG1BP-201ENST00000278882 761 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 RNU6-433P-201ENST00000363216 104 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 RNU6-97P-201ENST00000363387 104 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 RNU6-1155P-201ENST00000363554 107 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 RNU6-553P-201ENST00000364047 96 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 RNU6-744P-201ENST00000365557 107 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 RNU6-1316P-201ENST00000384242 108 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 SNORA54-201ENST00000384281 123 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 MIR491-201ENST00000384877 84 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 AL356421.1-201ENST00000403255 413 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 RNU2-71P-201ENST00000411395 189 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 RPS7P13-201ENST00000413955 498 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 AC092447.6-201ENST00000414578 210 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 SETP8-201ENST00000435341 628 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 UBE2V1P13-201ENST00000436983 439 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 AL831737.1-201ENST00000441288 271 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 ARPC3P2-201ENST00000457786 533 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 RPL7P23-201ENST00000493874 747 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 AC111000.2-201ENST00000507775 550 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 PCMTD1P2-201ENST00000565017 355 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP44Q9H0E7 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 PRELID3BP8-201ENST00000604148 295 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP44Q9H0E7 MIR4275-201ENST00000636486 87 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 MIR3974-201ENST00000637126 96 ntBASIC3.95□□□□□ -1.78
USP44Q9H0E7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
USP44Q9H0E7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP44Q9H0E7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP44Q9H0E7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 RNU6-343P-201ENST00000364709 104 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.94□□□□□ -1.78
USP44Q9H0E7 RNU6-629P-201ENST00000384061 103 ntBASIC3.94□□□□□ -1.78
USP44Q9H0E7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms