Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RPL37P25-201ENST00000507308 276 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC087373.1-201ENST00000524920 491 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 RANP3-201ENST00000530970 276 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC020895.1-201ENST00000595362 272 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AP003400.6-201ENST00000624698 740 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC026634.1-201ENST00000634369 198 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC241585.2-209ENST00000638217 143 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 HSPA8P4-201ENST00000511877 1920 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
UPF3BQ9BZI7 MTND5P31-201ENST00000419366 1374 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 RNU6-441P-201ENST00000384545 106 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 FNDC3CP-201ENST00000420795 1155 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 HMGN2P3-201ENST00000433603 273 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 HMGN2P5-201ENST00000436882 273 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC018634.1-201ENST00000437554 401 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 MTND1P33-201ENST00000446251 917 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 RPL7P12-201ENST00000446719 750 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 SNRPGP16-201ENST00000533275 226 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC106791.2-201ENST00000604680 391 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC090116.1-201ENST00000615679 446 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AC002543.1-201ENST00000299783 1954 ntBASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.76□□□□□ -1.97
UPF3BQ9BZI7 ZNF519P1-201ENST00000449011 1626 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 RPL21P132-201ENST00000331267 462 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 RNU6-253P-201ENST00000384730 105 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 RN7SKP140-201ENST00000411196 284 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 RPS15AP38-201ENST00000413110 372 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 HMGB3P31-201ENST00000413333 595 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 AC010881.1-201ENST00000433830 235 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 TRBV26-201ENST00000456572 344 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 XKRY-201ENST00000510392 1100 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 RNU6-202P-201ENST00000515998 96 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 MIR4446-201ENST00000578505 67 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 MIR5194-201ENST00000582634 120 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 AC016727.1-205ENST00000605437 569 ntBASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.75□□□□□ -1.97
UPF3BQ9BZI7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 RNA5SP289-201ENST00000362332 137 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 RNU5D-1-201ENST00000363299 116 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 RNU4-26P-201ENST00000410270 107 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AL590762.3-201ENST00000436372 640 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC015908.1-201ENST00000478739 476 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 OR9N1P-202ENST00000494289 481 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 HIGD1AP6-201ENST00000521833 279 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AP001804.3-201ENST00000525146 880 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 OR10V3P-201ENST00000525712 725 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC087241.2-201ENST00000535801 324 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 YWHAZP1-201ENST00000556286 722 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC090666.1-201ENST00000578241 445 ntBASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.74□□□□□ -1.97
UPF3BQ9BZI7 VN1R9P-201ENST00000614184 867 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms